Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0636 ATGTCCCCACCCCCATCAAGTGCAGCTTCATCGGATACCCCGAATTTTGTTCCGGTAAGCAAAACTCGAATCTTTGCCTTGTTTTTTGGGTACCCTTGTTTTTATTTTCCTATAAAATCTGCTATTCATGATCGGATTGCGTATTTGAGGTTTTCAGTTATGGATATGCGAGGAGATGGGATTTTCCCGGATGAGGTAGTTATTCAGATGCTCGCTAGGTTGCCTGTGAAGTCCATTTTCAGGTTCAAAACCGTGTGCAAATTGTGGTATAGGTTGTCTTTGGATAAGTATTTCATTCAACTCTACAATGAGGTGTCTAGGAAGAACCCCATGATTCTGGTGGAGATTTCAGATTCGTCTGAGTCCAAATCTAGCTTAATCTGTGTTGATAATTTAAGGGGTGTGTCTGAATTTTCACTGAATTTCTTGAATGATAGAGTCAAGGTTCGAGCATCTTGTAATGGCTTGCTGTGTTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTCTGCAATCCGGTCACTCGCAAGTACAGGTTGCTTCCCAAGAGTAGGGAAAGGCATGTGACTCGGTTTTATCCTGATGGCGAGGCTACCTTGGTTGCCTTGGCCTGTGATTCGGCGTATCAGAAGTTCAATGTTGTTCTAGCGGGCTACCATCGAACGTTTGGTCATAGGCCGGATGGGAGTTTCATATGTTTGGTGTTTGATTCGGAGTTGAACAAGTGGAGGAAGTTCGTTTCATTCCAAGATGACCATTTTACTCACATGAATAAGAACCAGGTTGTTTTTGTCAATAATGCTCTGCACTGGTTGACTGTTAGCTCTACTTATATACTTGTGCTTGATTTAAGTTGTGACGTTTGGAGGAAGATGCAATTACCGTATGACTTGATTTATGGAGCGGGCAATAGGATTTATCTCTTAGACTTTGATGGCTGCTTGTCTGTTATTAAAATTTCAGAAGCATGGATGAATATATGGGTGCTGAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTTCCAGGCATTTTTCCAATCAGTCAGACAGGTGAATGTGTCTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATCGCAAGACGCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACACTCCCGTTATGGTTTTCTGCTCATGCATATCGCAGCACAATGTTCTCATGTAACTGA 1242 0.4187 MSPPPSSAASSDTPNFVPVSKTRIFALFFGYPCFYFPIKSAIHDRIAYLRFSVMDMRGDGIFPDEVVIQMLARLPVKSIFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISDSSESKSSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTRKYRLLPKSRERHVTRFYPDGEATLVALACDSAYQKFNVVLAGYHRTFGHRPDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDVWRKMQLPYDLIYGAGNRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGECVFLATHKQILVYHRKTQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0636 413 SUPERFAMILY F-box domain 61 131 IPR036047 GO:0005515
Aed4g0636 413 Gene3D - 62 98 - -
Aed4g0636 413 ProSiteProfiles F-box domain profile. 62 105 IPR001810 GO:0005515
Aed4g0636 413 TIGRFAM F_box_assoc_1: F-box protein interaction domain 152 378 IPR017451 -
Aed4g0636 413 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 60 411 - -
Aed4g0636 413 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 60 411 - -
Aed4g0636 413 SMART fbox_2 62 102 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0636 Aed-Chr4 5429083 5430324 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0636 - - gmx:100811223 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0636 4 5429083 5430324 Aed4g0636 4 5429083 5430324 ECH