Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0622 ATGGTGAAGGTGCGCATGAACACGGCTGATGTCGCCGCGGAGGTCAAATGCCTCCGCCGCCTTATCGGAATGCGATGCTCCAACGTCTACGATCTCTCTCCCAAGACCTACGTGTTCAAGCTGATGAACAGCAGTGGAGTTTCGGAATCCGGGGAGAGCGAGAAGGTTCTGCTGCTGATGGAAAGTGGCGTGAGATTGCACACTACTATCTACATGCGTGACAAGAGCAACACTCCTTCTGGTTTCACTCTCAAATTGAGGAAGCACATTCGAACCAGAAGGCTCGAGGACGTGCGCCAACTTGGGTACGATCGGATTGTTCTCTTTCAATTTGGACTCGGGGAGAATGCCAACTATCTTATATTGGAGCTGTATGCTCAGGGGAACATCCTCCTCACAGATTCTAGTTTTACCGTCATGACTCTGCTACGCTCTCACAGGGATGATGATAAAGGGCTTGCAATTATGTCACGCCATCGTTATCCTGTGGAAAGTTGTAGAGTTTTTGAGCGAACTACTATTGAAAAGTTGCAGACATCCCTAGTGTCTTCCAGGGAAGATGGTAATGATGAGGCTGGTAAGGCTAATGGAAATGGAAGTAATGCTTCTAATGTAGCGAAAGAGAAGCAGGGTACCCACAAAGGTGGGAAGTCGTCTGCCACATTGAAAACTGTCCTTGGGGAGGCACTTGGTTATGGACCTGCACTTTCTGAACATATAATAGTAGATACGGGCCTAATCCCCAGTACAAAAGTTCCCAAAGATAGAATGTGGGATGATGCTACTGTTCAGGCTTTGGTCCAAGCGGTTGAAAAGTTTGAAGATTGGATGCAGGATGTTATTTCAGGTGAATTAATCCCTGAAGGATACATTTTAATGCAGAACAAAAATTTGGGGAAAGATTCTTCCATATCTCAACCAGGAAGTGTAAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAGTTTAAGTCAAGGGATTATACAAAGTTTGAGACATTTGATGCAACATTGGATGAGTTCTATAGTAAAATTGAGAGTCAAAGGTCTGAACAACAGCAACAAGCCAAAGAAAACTCAGCTGCTCAGAAACTTAATAAGATTCGCCGGGATCAGGAAAATCGAGTACATGTTTTGAGGAAAGAAGCTGATCACTGTGTTAGGATGGCAGAATTGATAGAATACAACTTGGAAGATGTGGATGCTGCTATTTTAGCTGTTCGTGTAGCTCTTGCAAAGGGAATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCTATTTTTAATTCCTTTCTCCTTGAATGTTTAACATTAGTAACTAGTATGCTTATGTTCAAGGTTGAAGTTGATTTAGCTCTCTCAGCACATGCCAATGCCAGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGTAAACAGGAAAAAACTGTAACTGCCCATGAAAAGGCATTTAAAGCTGCAGAGAGAAAGACTCGCCTACAGCTTAGTCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGTAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAATTATTTGGTTATTAGTGGACGTGATGCACAGCAAAATGAGCTGATAGTGAAGCGTTATATGTCAAAAGGAGATCTATATATCCATGCTGATCTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAGCCTGCACAACCAGTTCCACCTCTGACCCTAAATCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCGAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACTGCTCCTACAGGTGAATATCTGACAGTAGGGAGTTTCATGATCCGTGGAAGGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGCCTACTATTTCGCTTGGAAGAGAGTTCCTTGGGATCCCATTTAAATGAAAGAAGAGTAAGAGGAGAGGAGGAAGCAGCAGATGATTATGAAGAAACTGGCCCTATTGAAGATATATCTGATTCAGAGTCTGAGAAGGATGTCACTGATATAAAATCTGCCACTGACTCAGAAAGGAATGGTAATTTGTCGGCAGATTCACACAAGCCCCTACCAGAAGACTTCCCTGCAGATTCATCTCAAACTAATTTGGCTACTATCAATGCTGAGACTGCAATTTCACAGGATTTCCTCGCAAAAGAGACAAGTGCGTCGAATATGATTGATAGGGAGATTTTATCAGGTGGTGGAACTGGAAATGGCTTAGCATCTGTGACCCCTCAACTTGAGGAGCTCCTTGATCAAGCTCTAGAACTTGGATCTGTTGCTAAATCAAGTAAAAAATATGGAATTGAGAAGTCTCAAATTGATTTAGACACTGAAGAACATTTTGAACAAAACAAAGCTGCAGTAAGGGATAAACCTTATGTATCAAAAGCTGAGAGACGAAAGCTTAAAAAAGAACAGAAACATGGAGAAACAGATTTGAATGTTGAACATGGAAAGGATGAATCAAAGCTAAAAGATATTTCTGCTAATCTACCAGCAAAAGAAGATCAAAATTTGAAAAAAGAGGGTGGTCAAAAAATCAGCCGTGGACAGAAGGGCAAGCTTAAGAAGATAAAGGAGAAGTATGCTGACCAGGACGAGGAAGAAAGGAGCATCCGAATGGCATTGTTGGCTTCTTCTGGAAAATCAATCAAGAAGGAAGAAACGTCATCTGAAAATGATGCATTGGACAAAGTGAAAAAGCCTGCCAGTGGTCCTTCTGATGCTCCAAAAATATGTTACAAGTGCAAGAAGGTAGGTCACTTATCTCGGGATTGTAAGGAGCAACCAGATAATCTGTTGCACAGAAATGCAATTGGTGAAGCTGAAGAAAATCCCATAGCAACTGCTATTGACACTTCCCAAGCAGATAGGGTGGCAATGGAAGAAGTTGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTTAATGACGTGGATTACTTGACAGGGATTCCACTTCCTAATGACATTCTCTTATATGCCGTTCCTGTTTGTGGTCCTTACAGTGCAGTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCAGCAAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACTTATTCAGCCACATGTCAGAAGCAACAACCAGGGAGAAGGAGTTGATGAAAGCCTGTACAGATCCTGAGCTCTATGCTGCACTTATTGGTAATGTGAAAATATCAGCAGCTGGCCTTTCACAACTGAAGCAAAAACAAAAGAAAGGAAAGAAGAGCACCAAACAAGGGAGTTAG 3363 0.4213 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHTTIYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIVLFQFGLGENANYLILELYAQGNILLTDSSFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLQTSLVSSREDGNDEAGKANGNGSNASNVAKEKQGTHKGGKSSATLKTVLGEALGYGPALSEHIIVDTGLIPSTKVPKDRMWDDATVQALVQAVEKFEDWMQDVISGELIPEGYILMQNKNLGKDSSISQPGSVSQMYDEFCPILLNQFKSRDYTKFETFDATLDEFYSKIESQRSEQQQQAKENSAAQKLNKIRRDQENRVHVLRKEADHCVRMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPIFNSFLLECLTLVTSMLMFKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRLQLSQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNELIVKRYMSKGDLYIHADLHGASSTVIKNHKPAQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGRKNFLPPHPLIMGFGLLFRLEESSLGSHLNERRVRGEEEAADDYEETGPIEDISDSESEKDVTDIKSATDSERNGNLSADSHKPLPEDFPADSSQTNLATINAETAISQDFLAKETSASNMIDREILSGGGTGNGLASVTPQLEELLDQALELGSVAKSSKKYGIEKSQIDLDTEEHFEQNKAAVRDKPYVSKAERRKLKKEQKHGETDLNVEHGKDESKLKDISANLPAKEDQNLKKEGGQKISRGQKGKLKKIKEKYADQDEEERSIRMALLASSGKSIKKEETSSENDALDKVKKPASGPSDAPKICYKCKKVGHLSRDCKEQPDNLLHRNAIGEAEENPIATAIDTSQADRVAMEEVDINEIGEEEKEKLNDVDYLTGIPLPNDILLYAVPVCGPYSAVQSYKYRVKIIPGPAKKGKAAKTAMNLFSHMSEATTREKELMKACTDPELYAALIGNVKISAAGLSQLKQKQKKGKKSTKQGS 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0622 1120 Pfam NFACT protein C-terminal domain 1005 1098 IPR021846 -
Aed4g0622 1120 Gene3D - 939 1019 - -
Aed4g0622 1120 SUPERFAMILY Retrovirus zinc finger-like domains 937 963 IPR036875 GO:0003676|GO:0008270
Aed4g0622 1120 MobiDBLite consensus disorder prediction 180 218 - -
Aed4g0622 1120 ProSiteProfiles Zinc finger CCHC-type profile. 945 960 IPR001878 GO:0003676|GO:0008270
Aed4g0622 1120 MobiDBLite consensus disorder prediction 917 933 - -
Aed4g0622 1120 MobiDBLite consensus disorder prediction 663 728 - -
Aed4g0622 1120 MobiDBLite consensus disorder prediction 194 208 - -
Aed4g0622 1120 MobiDBLite consensus disorder prediction 833 887 - -
Aed4g0622 1120 Pfam NFACT N-terminal and middle domains 218 507 - -
Aed4g0622 1120 Pfam NFACT N-terminal and middle domains 10 149 - -
Aed4g0622 1120 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1108 - -
Aed4g0622 1120 SMART c2hcfinal6 944 960 IPR001878 GO:0003676|GO:0008270
Aed4g0622 1120 Pfam Zinc knuckle 944 960 IPR001878 GO:0003676|GO:0008270
Aed4g0622 1120 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Aed4g0622 1120 PANTHER - 3 1108 - -
Aed4g0622 1120 Pfam NFACT protein RNA binding domain 524 635 IPR008532 -
Aed4g0622 1120 Coils Coil 364 384 - -
Aed4g0622 1120 MobiDBLite consensus disorder prediction 688 703 - -
Aed4g0622 1120 MobiDBLite consensus disorder prediction 913 939 - -
Aed4g0622 1120 MobiDBLite consensus disorder prediction 833 881 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0622 K24971 - gmx:100807437 1930.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0622 4 5290183 5299244 Aed4g0622 4 5290183 5299244 ECH