Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0615 GTGATCACCGAAACTTTAAAGGGACAATTGTGGAATTTACGTGAGAATCACTGCATTGTTTCTGGTCTTTACGAGACGAGGACTGTTCAAGTTAAGCAGCTTTCAGATCTAGCTGGTGAGAGAGAGATTCACGAGTTCTTCTCATTTTCTGGAGAAATCGAGCATGTTCAGATCCTGAGTGAAGATGGGAAATCAAAGACTGCATATGTGACATTTAAAGATCCCAAAGCACTTGAAATTGCATTATTGTTATCGGGAGCAACTATTGTAGACCAGGTCGTGAAGATAACTCCAGCTGAGAACTATGTATCAAATCGTGAGATGCAGGAAGTAAGGGTGGTGGAAAGTGCCATAAATGTTGCTCCTTCCGAGAATTCTGAGATTGTCTCCTCAAATATTGAGGATGGGAAAGCCAGTCCCACCAATAGAAAAATCTACCTTAGTAAAGCACAAGATGCAGTTACAAATATGCTGGCGAAAGGTTCAGCAATGAGACAAGATGCAGTGAACAAAGCTAAAGCATTTGATGAAAAGCATCAATTGACTGCCAATGCATCTGCAAAGGTCATTTCTTTTGACAAAAGAGTTGGACTGACGGAGAAATTTACAGTAGGCATTGCTGCAGTGAATCAGAAAGTCAAGTCTGTGGATGAAAGGCTTCATGTTTCAGACAAAACAATGGCAGCAATAATTGCAGCTGAAAGGAAGATAAATGACACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACAGCATGGTTAAATGGTGCTTTTAGCAAGGTGGCAAAGGCTGGACATGTTGCAAGTACTAAAACTAGAGAAAAATTTCATATGGCTGTTTCAAACTTGTCAGCAAAGGAATCGTCAGTGGCTGCTGCATAG 891 0.4108 VITETLKGQLWNLRENHCIVSGLYETRTVQVKQLSDLAGEREIHEFFSFSGEIEHVQILSEDGKSKTAYVTFKDPKALEIALLLSGATIVDQVVKITPAENYVSNREMQEVRVVESAINVAPSENSEIVSSNIEDGKASPTNRKIYLSKAQDAVTNMLAKGSAMRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKFTVGIAAVNQKVKSVDERLHVSDKTMAAIIAAERKINDTGSAVKTSRYVTAGTAWLNGAFSKVAKAGHVASTKTREKFHMAVSNLSAKESSVAAA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0615 296 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 24 295 - -
Aed4g0615 296 SUPERFAMILY RNA-binding domain, RBD 24 106 IPR035979 GO:0003676
Aed4g0615 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 101 IPR000504 GO:0003723
Aed4g0615 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 92 IPR000504 GO:0003723
Aed4g0615 296 SMART rrm1_1 28 97 IPR000504 GO:0003723
Aed4g0615 296 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 24 295 - -
Aed4g0615 296 Gene3D - 24 97 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0615 Aed-Chr4 5213005 5217208 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0615 - - gmx:100812446 471.855