Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0587 ATGGAAGCTCAACAGGTTCTTTCCAGATTTTGTCCAAAATCACCATCATCACCATCAATTCCAATTGCGAAACAACTATTTTCTTTAAAGCTCCATCCTTTACCCTCTTCATCGTCATACCCTGTTGTTCGTTCTCAGAATCCTATCTTTCCTATCAGCATTGCACATAGAGAAGTGTGTACTAGTTCTAGGAGGAAAATATGGTGCAGCAGGAGTGGTAGTACTGCTGAACCAAAGGAGGGCCATGAGGTGAAGGCTCAGATCACAGTGAGAAGGAAAAAGCTAGCAGTTTTCGTGTCTGGTGGAGGATCCAACTTCAGATCAATCCACGAGGCCTCCAAAGGGGGATCACTTCATGGAGATGTTCTTGTTTTGGTCACAAATAAAAGTGATTGTGGAGGTGCGGAATATGCAAGAAATAATGGTATCCCAGTTATATTTTTCCCTAAAGCAAAGGATGAATCCAATCCAATTGACCTTGTTGATACACTAAGGAAATACGAGGTTGATTTTATTCTTTTAGCTGGATACCTCAAACTTATACCAGTGGAATTGACCCGAGCTTATGAAAGACGTATATTCAACATTCATCCATCACTTCTTCCAGCTTTTGGAGGCAAGGGCTACTATGGCATGAAGGTGCATAAAGCAGTAATTGATTCTGGAGCAAGGTTTTCAGGTCCTACCATTCATTTTGTTGATGAACACTATGACACAGGACGTATCCTAGCACAGCGTGTTGTCCATGTGCTTGCCAATGATACTGCAGAGGATTTGGCTGCAAGGGTTCTCAAGGAGGAGCACCAATTATATGTGGAGGTGGTGGAGGCTTTATGCGAAGAGCGTGTGGTTTGGAGGAAAGATGGTGTTCCTATCATCCAAAGCAAAGAAAACCCCAATGAGTTTTACTGA 912 0.4265 MEAQQVLSRFCPKSPSSPSIPIAKQLFSLKLHPLPSSSSYPVVRSQNPIFPISIAHREVCTSSRRKIWCSRSGSTAEPKEGHEVKAQITVRRKKLAVFVSGGGSNFRSIHEASKGGSLHGDVLVLVTNKSDCGGAEYARNNGIPVIFFPKAKDESNPIDLVDTLRKYEVDFILLAGYLKLIPVELTRAYERRIFNIHPSLLPAFGGKGYYGMKVHKAVIDSGARFSGPTIHFVDEHYDTGRILAQRVVHVLANDTAEDLAARVLKEEHQLYVEVVEALCEERVVWRKDGVPIIQSKENPNEFY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0587 303 Pfam Formyl transferase 93 275 IPR002376 GO:0009058
Aed4g0587 303 Gene3D - 73 301 - -
Aed4g0587 303 SUPERFAMILY Formyltransferase 93 295 IPR036477 GO:0009058
Aed4g0587 303 ProSitePatterns Phosphoribosylglycinamide formyltransferase active site. 227 250 IPR001555 -
Aed4g0587 303 PIRSF FormyFH4_hydr 24 295 - -
Aed4g0587 303 TIGRFAM PurN: phosphoribosylglycinamide formyltransferase 93 283 IPR004607 GO:0004644|GO:0006189
Aed4g0587 303 CDD FMT_core_GART 94 278 IPR004607 GO:0004644|GO:0006189
Aed4g0587 303 Hamap Phosphoribosylglycinamide formyltransferase [purN]. 94 281 IPR004607 GO:0004644|GO:0006189
Aed4g0587 303 PANTHER PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 56 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0587 Aed-Chr4 4967404 4971193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0587 K00601 - gmx:548052 476.478