Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0583 ATGTATCTCCCCCGCCACCATATCCTCACCAGACTCTCCCCTTACCGCCGCCACTTCTCCCACTCCGCCGCCGCAGTCCTCCTCCCCCCGGATCCGGAGCCCCTGACCTACCTCCCTGGCTTCCCCCGCCCCGATGCCAAGCACGACGAGACGATCCTCGCCATCCCCCGCGCCGACTCCGGCAAGAACATCTCCGCGAAGGAGCGCCGCGTCGGGCGCCTCCCGAGCATCGTGTTCGAGCAGGAAGACGGCCAGCACGGCGGCAACAAGCGCCTCATCTCCGTCCGCACCGACCAGATCAGAAAACTCGTCAACCACCTCGGCCGCTCCTTCTTCCTCTCCCGCCTCTTCCGCCTCGAAGTCCGCTCCCAATTCGACGACTCCGAGAACGACCCCGTCGAGTCCGTACGCGTCTTGCCTCGCGCGATTCATTTGAAAGCTGGCTCAGACGCGCCGTTGAATGTGACTTTTATTAGGGCTCCGTCGGATGCTTTGTTGAAAGTTGATGTTCCTCTTGTCTTCATAGGAGAAGATTATGTGCTACTGCCTACTGTTAATCTGACGGCAAGTGCTTCTTTGAATACCATCAAAAGGACTGTCAAGTACCTGTGCCCTGCTGACATTATTCCCCCATATATTGACGTTGATCTAAGTGAGTTGGATGTGGGCCAGAAGTTGGTCATGGGAGATCTCAAAGTTCATCCCGCATTAAAACTTGTTCAGTCAAGAGATGAAGCCGTTGTTAAAATTATGGGCCAAAGAGTTTCTGAACTACAAAAGAAAAAGTAA 789 0.5539 MYLPRHHILTRLSPYRRHFSHSAAAVLLPPDPEPLTYLPGFPRPDAKHDETILAIPRADSGKNISAKERRVGRLPSIVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFRLEVRSQFDDSENDPVESVRVLPRAIHLKAGSDAPLNVTFIRAPSDALLKVDVPLVFIGEDYVLLPTVNLTASASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVQSRDEAVVKIMGQRVSELQKKK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0583 262 Pfam Ribosomal protein TL5, C-terminal domain 166 252 IPR020057 -
Aed4g0583 262 Pfam Ribosomal L25p family 54 157 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Aed4g0583 262 SUPERFAMILY Ribosomal protein L25-like 56 252 IPR011035 GO:0006412
Aed4g0583 262 Gene3D Ribosomal protein L25, beta domain 162 259 IPR037121 -
Aed4g0583 262 PANTHER BNAA01G13300D PROTEIN 18 261 - -
Aed4g0583 262 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 18 261 - -
Aed4g0583 262 CDD Ribosomal_L25_TL5_CTC 51 159 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Aed4g0583 262 Gene3D Ribosomal Protein L25; Chain P 51 160 IPR020056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0583 Aed-Chr4 4925946 4929115 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0583 K02897 - gmx:100779285 455.677