Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0580 ATGATTGTGAATGATGAGAATTGTGGTGTTGGAGGAGGAGAAAGATGGTTGCGGGGTTTTGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCTGTTCATGTACGGAGGCGTGCTCAATTGGCTAGGAAGCTATCTGCTGTTGATCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTACATTCTCATTGGAACAGTTGCTAGAGAGCAAGCAGGACCAGCGCTTGTGATATCACTCCTCATTGCTGGAATAGCTGCTGGACTGTCAGCTTTTTGCTATGCTGAGCTTGCATGTCGGTGTCCATCTGCGGGGAGTGCTTATCATTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTCGGTTGGTCTCTGATTCTAGAATATACAATTGGTGCTTCGGCTGTTTCTCGTGGCATAACCCCAAATCTGGCCTTGTTTTTCGGTGGAGAGGAAAACCTACCTTCTTTTTTGGCTCGACATACCTTACCAGGTCTTGATATTGTGGTTGATCCATGTGCAGCTGCATTAATTCTTCTTGTTACTGTACTCCTGTGCCTTGGAATCAAGGAGAGTTCAACAGCACAATCCATTGTGACAACAGTAAACGTCTGTGTCATGCTTTTCATCATTTTGGTTGGTGGATATCTAGGTTTCAAGTCTGGATGGGTTGGATATAAACTCTCCGGCGGGTTTTTTCCTTATGGAGTGAATGGGATGTTTACTGGGTCTGCAATAGTTTTCTTTTCATACATTGGTTTTGATTCAGTGAGCAGCACAGCTGAGGAGGTCAAAAATCCTCAACGAGACTTGCCAATTGGCATATCAACAGCGTTAACTATATGTTGCATTCTGTATATGCTTGTAGCAGCAGTTATTGTTGGCTTAGTACCATATTATGAGTTGAACCCTGATACGCCAATCTCCTCGGCATTTTCTAGCTATGGGATGCAATGGGCAGTGTATATAATAACAACTGGAGCTGTTACTGCTCTTTTTTCCAGTTTGCTGGGTTCTGTTCTTCCTCAGCCACGTGTCTTTATGGCAATGGCTAGGGATGGTTTATTGCCTCCTTTCTTCTCAGACATCCATAAAGGCACACAGATTCCCTTGAAAAGTACTATTGTCACTGGCATCTTTGCGGCTACTCTTGCATTCTTTATGGATGTTTCCCAATTAGCAGGGATGGTTAGCGTGGGAACACTGCTTGCATTTACCACTGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCTCCTGACGAGGTACCCATTCCAGCTTCACTTCTACCATCTGCTGATCTATTATTGAGGCATTCTGGTGGTGTTATTGAAGAAGATAGGGCCATAAGTCCTGTAGATCCTGCTAGCTATTATGAGAACGACCTACATGACAAAACAGAAGCTCTACTCGGGCATCCCTTAATCATAAAAGAAGTGACTAATGATGAACAGAATGAGAAAGCTAGGCGGAAACTTGCTTCATGGACCATAGCCCTTCTATGTATAGGGATTCTCACAGTTACCAGTGCGGCTTCAGCTGACAGGTGTCCCAGGATTTTGCGCTTAACATTGTGTGGAATGGGTGGTTTTGCTTGCCCATTTGTTCCATTCTTACCTGCTGCATGTATTCTTATAAACACCTACTTACTAATTGATCTTGGAGTTTCCACATGGCTGCGGGTATCGGTATGGTTGTTGTTAGGAGTGTTTGTGTACTTGTTCTATGGCCGCACTCACAGCTCACTGTTGCATGCAATCTATGTTCCCTCAGCATATGCTGATGAAATCCATCGTTCTCAAGCAATTCATCTTGCCTAG 1833 0.4403 MIVNDENCGVGGGERWLRGFGSLIRRKQVDSVHVRRRAQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLLIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVSRGITPNLALFFGGEENLPSFLARHTLPGLDIVVDPCAAALILLVTVLLCLGIKESSTAQSIVTTVNVCVMLFIILVGGYLGFKSGWVGYKLSGGFFPYGVNGMFTGSAIVFFSYIGFDSVSSTAEEVKNPQRDLPIGISTALTICCILYMLVAAVIVGLVPYYELNPDTPISSAFSSYGMQWAVYIITTGAVTALFSSLLGSVLPQPRVFMAMARDGLLPPFFSDIHKGTQIPLKSTIVTGIFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPIPASLLPSADLLLRHSGGVIEEDRAISPVDPASYYENDLHDKTEALLGHPLIIKEVTNDEQNEKARRKLASWTIALLCIGILTVTSAASADRCPRILRLTLCGMGGFACPFVPFLPAACILINTYLLIDLGVSTWLRVSVWLLLGVFVYLFYGRTHSSLLHAIYVPSAYADEIHRSQAIHLA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0580 610 PIRSF AA_transporter 498 594 - -
Aed4g0580 610 PIRSF AA_transporter 21 434 - -
Aed4g0580 610 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 533 603 - -
Aed4g0580 610 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 17 535 - -
Aed4g0580 610 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 533 603 - -
Aed4g0580 610 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 17 535 - -
Aed4g0580 610 Pfam C-terminus of AA_permease 535 585 IPR029485 -
Aed4g0580 610 Pfam Amino acid permease 44 426 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aed4g0580 610 Gene3D Amino acid/polyamine transporter I 39 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0580 Aed-Chr4 4888414 4895678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0580 20 610 Organic Solute Cotransporters AT3G03720 61.997 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0580 K13863 - gmx:100816704 1063.14