Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0579 ATGGGTGTTTTGGTTGATTCATGGGATTGCCTGAAGTTTTTGACTAGGAGGAAGCAGGTTGATTCTCCACGTAGGAACACAGAGACTCTTCTTGCCAAGGAGTTAACTGTTCCTCATCTCATTGCAGTTGGTGTTGGTTCAACGATTGGTGCTGGAGTGTATGTTCTGGTGGGAGCAGTTGCACGGGAGCACGCTGGACCCGCTTTGGCCATTTCATTTCTGATAGCTGGATTAGCAGCTGGTCTCTCTGCATTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGAAGTGCATATCACTATTCATACATATGTGTTGGGGAAGGTGTTGCTTGGTTGATTGGCTGGGCCTTGATATTGGAATATACAATTGGCAGTGCTGCTGTTGCTCGTGGCATAACCCCCAATCTGGCCGAACTTTTTGGTGGCGTGGAGAATTTACCCATCTTCTTAAAGCGGCAGAGTATTCCTGGAATAGATATTGTTGTGGACCCATGTGCAGCAATCTTTGTATTAGTTGTTGCTGGACTCCTATGTGTGGGGATCAAGGAGAGTACAGTGGTACAAGGCATAGTGACAGCAGTGAATGTATGTGCATTGTTTTTTGTGATAGTAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTATGGGGTTTTTCCCCTTTGGGCTTAATGGGATGCTGGCTGGTTCTGCAACAGTATTCTTTGCATATATAGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAGATTTACCCTTTGGTATTGGTGGTGCATTGTTTATTTGTTGTGGGATATATACGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCATCTGCATTTGCTGATCAAGGGATGCAATGGGCAGCCTCTGTGCTCAGCATTGATGGGTGGGATACTTCCCCAGATCTAAATAAAGGTGATCTGCGAAGAGTTGTTGGGTGGATCATAGCATTCATATGCTTAGGGGCGTTTGTCCTTACATATGCAGCTTCAAATTTCACTCTTCTTAGTTCTGTTCGCTTCGCATTATGTGGACTTGGTGGTGCTACTCTTTTTTGTGGTTTTGTTTTCCTAACATGCATAAATCAAGATGATGCAAGACACAACTTTGGGCACTCTGGAGGTTTCATTTGCCCATTTGTGCCACTGCTTCCTATAGCTTCCATTCTCATTAATTCCTACTTACTTGTTAATCTTGGATATGGTATATGGCTCCGTGTTTCTATATGGCTAGCAGCAGGACTTCTAGTTTATCTGTTCTATGGCCGAACCCATAGCTCTCTAAAAGATGCAATTTATGTGCCAGCAAAGCAAGTGGGTGAAATTTATCAGAATTACAGAAGCTGTCTTACTTAA 1437 0.4384 MGVLVDSWDCLKFLTRRKQVDSPRRNTETLLAKELTVPHLIAVGVGSTIGAGVYVLVGAVAREHAGPALAISFLIAGLAAGLSAFCYAELASRCPSAGSAYHYSYICVGEGVAWLIGWALILEYTIGSAAVARGITPNLAELFGGVENLPIFLKRQSIPGIDIVVDPCAAIFVLVVAGLLCVGIKESTVVQGIVTAVNVCALFFVIVAGGYLGFKSGWVGYELPMGFFPFGLNGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPFGIGGALFICCGIYTMVSIVVVGLVPYYAIDPDTPISSAFADQGMQWAASVLSIDGWDTSPDLNKGDLRRVVGWIIAFICLGAFVLTYAASNFTLLSSVRFALCGLGGATLFCGFVFLTCINQDDARHNFGHSGGFICPFVPLLPIASILINSYLLVNLGYGIWLRVSIWLAAGLLVYLFYGRTHSSLKDAIYVPAKQVGEIYQNYRSCLT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0579 478 Pfam C-terminus of AA_permease 403 453 IPR029485 -
Aed4g0579 478 PIRSF AA_transporter 12 323 - -
Aed4g0579 478 PIRSF AA_transporter 332 466 - -
Aed4g0579 478 Pfam Amino acid permease 39 322 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aed4g0579 478 Gene3D Amino acid/polyamine transporter I 31 324 - -
Aed4g0579 478 PANTHER PROTEIN, PUTATIVE-RELATED 332 465 - -
Aed4g0579 478 PANTHER PROTEIN, PUTATIVE-RELATED 11 319 - -
Aed4g0579 478 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 332 465 - -
Aed4g0579 478 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 11 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0579 Aed-Chr4 4869307 4876559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0579 323 462 Organic Solute Cotransporters AT3G03720 48.227 1.38e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0579 K13863 - gmx:100784895 570.081