Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0570 ATGGGGCAGCTCAAAATCTTCATGGCCTCCTTCATGGTAACCTCAATCCTGTTCTTTCTCCTCTTCATCCCCACAAGACTAACCATGCAATTCTCAAGCCTGAGACCATCTATAAACAACATCAGTGTCCCCACCAAGGGTTCATATCCAGTTACTTTTGCATACTTGATCTCTGCATCAAAGGGTGATGTTGTGAAGCTCAAGAGGCTGATGAGGGTGCTGTACCATCCAGGGAACTTCTATCTGATCCATGTGGATTATGGTGCTCCAAAGGCTGAGCACAGGGCTGTGGCAGAGTTTGTGGCTAGTGATCCTGTTTATGGCCAAGTTGGGAATGTTTGGATTGTGGGGAAGCCTAATTTGGTCACTTATAGAGGACCAACCATGCTTGCCACCACTCTCCATGCCATGGCTATGCTTCTAAGGACCTCCCAATGGGACTGGTTTATTAATCTTAGTGCTTCTGATTATCCCTTGGTTACACAAGATGATCTGATCCAAGCGTTTTCTGAGTTGCCAAGGAGTGTCAATTTCATACAGCACAGCAGTCAATTGGGTTGGAAATTCAATAAGAGAGGGAAGCCAATACTCATAGATCCGGGGCTGTACAGCCTCAATAAATCAGAAATTTGGTGGGTTATTAAGCAGAGGAGTTTGCCAACATCTTTTAAGCTCTACACAGGTTCAGCATGGACAATACTCTCAAGATCTTTTGCAGAATATTGCATAGTGGGGTGGGAAAATCTCCCAAGGACCCTCCTCCTCTACTACACCAACTTTGTGTCATCCCCTGAAGGATACTTCCAAACAGTTATATGCAACTCTGCAGACTACAAGAACACAACAGTTAACCATGATCTTCACTACATTACTTGGGACAACCCTCCAAAACAGCACCCTAGGTCTCTAGGGCTCAAGGATTACAGGAGAATGGTTCTTACGAGCCGCCCATTTGCCCGGAAATTCAAGAGAAACGATCCAGTGCTTGATAAGATTGATAGAGAGCTTCTGAAGAGGTATCATGGGAAATTTTCATATGGTGGATGGTGCTCTGAGGGTGGTGGAAAACACAAAGCATGCTTAGGTTTGAGAACTGAGAGTTATGGTGTGCTTAAGCCTGGTCCTGCCTCAAGAAGGCTCAAAAATCTTCTAACTAAACTTCTGTCTGATAAATTCTTTCGCAAACAACAGTGTAGGTAA 1200 0.4458 MGQLKIFMASFMVTSILFFLLFIPTRLTMQFSSLRPSINNISVPTKGSYPVTFAYLISASKGDVVKLKRLMRVLYHPGNFYLIHVDYGAPKAEHRAVAEFVASDPVYGQVGNVWIVGKPNLVTYRGPTMLATTLHAMAMLLRTSQWDWFINLSASDYPLVTQDDLIQAFSELPRSVNFIQHSSQLGWKFNKRGKPILIDPGLYSLNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSADYKNTTVNHDLHYITWDNPPKQHPRSLGLKDYRRMVLTSRPFARKFKRNDPVLDKIDRELLKRYHGKFSYGGWCSEGGGKHKACLGLRTESYGVLKPGPASRRLKNLLTKLLSDKFFRKQQCR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0570 399 PANTHER GLYCOSYLTRANSFERASE 6 398 IPR044610 GO:0015020
Aed4g0570 399 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 6 398 - -
Aed4g0570 399 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0570 Aed-Chr4 4778656 4782882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0570 13 399 Glycosyltransferase AT4G27480 53.470 4.61e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0570 - - gmx:100818137 756.903