Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0559 ATGGCCTCAAAGCTGCTTTTGCAGAGAAGGCTCTTTAGGTTTTTGCAACTGTCACCACTTTCTTCTTTAAAAGCTTCAGAATTCGTTTTTCTCTGCGAGGAGAATGCTCTTGTTGCTCCTCCTCTCTTTTCTTCTTCTAGAAACTTCTGCTCTCGCAGTTTTAATCTTGATCAATCTCAAGGCCCTCTCACTATTGATTACAGGTACGACTATGGAGACTCTGTTGAAATTGATGGATTTGACATAGACTATGGGAATGATGTTTTGACTATAAAACTTGGCGATCTTGGCACCTATGTATTGAACAAACAAACACCAAATAGACAACTTTGGCTGTCTTCTCCTGTGAGTGGTCCTTCAAGGTTTGATTGGGATTGGGATACTGAAGCTTGGATTTATAGGCGGAACAAAGCAAACTTGTATAAAATTTTGGAAGGTGAGTTGCAGCAGTTATGTGGCAAACCCATTGTTCTTTCCTAA 480 0.4021 MASKLLLQRRLFRFLQLSPLSSLKASEFVFLCEENALVAPPLFSSSRNFCSRSFNLDQSQGPLTIDYRYDYGDSVEIDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDWDTEAWIYRRNKANLYKILEGELQQLCGKPIVLS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0559 159 SUPERFAMILY Frataxin/Nqo15-like 69 156 IPR036524 GO:0008199|GO:0016226
Aed4g0559 159 TIGRFAM mito_frataxin: frataxin 75 149 IPR017789 GO:0004322|GO:0005739
Aed4g0559 159 Gene3D Frataxin/CyaY 46 159 IPR036524 GO:0008199|GO:0016226
Aed4g0559 159 ProSiteProfiles Frataxin family profile. 47 156 IPR002908 GO:0008199|GO:0016226
Aed4g0559 159 ProSitePatterns Frataxin family signature. 100 114 IPR020895 -
Aed4g0559 159 PRINTS Frataxin signature 101 116 IPR002908 GO:0008199|GO:0016226
Aed4g0559 159 PRINTS Frataxin signature 86 101 IPR002908 GO:0008199|GO:0016226
Aed4g0559 159 TIGRFAM FeS_CyaY: iron donor protein CyaY 80 157 IPR002908 GO:0008199|GO:0016226
Aed4g0559 159 SMART Frataxin_Cyay_2 63 159 IPR002908 GO:0008199|GO:0016226
Aed4g0559 159 PANTHER FRATAXIN 70 157 IPR002908 GO:0008199|GO:0016226
Aed4g0559 159 Pfam Frataxin-like domain 73 155 IPR002908 GO:0008199|GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0559 Aed-Chr4 4632663 4635325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0559 K19054 - gmx:100815916 244.588