Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0555 ATGATCAGGTCCTTGTTGTCTCTAGCAGTTTCCTCACAAAAATGGCCGACCAATTGTGTTCCAACACTAATCTCAATTCTATGTTGTGTTGTTTTCCTTATACTTGATTTTCTTGATGCTGTTTTCTGCATTATCTATAGATTCCTTGATGAACGCATTGAAGGGGATGAGGCTTCCCCTTGTTGCTGTTCTAGCTGGGAAAGGCAGAATAGGATAATAAATGTGACAGATGATGATGGTCTATCTAATAGCTTGTATGAGAGAAAAAACACTTTTAGAGAAATGGGGTTCCTTCAATTTGAGAGAAAAAGGGAAGGTTCCAATAGAAAACAACATGGTAGAGGTGGTGGAAAGTTGGTGAAACGTTGGTCTGATTGTGGCTGTGAGTCTTGCCTTTCATGGATGAATCATGGAACCACTGATGAGAACTTCAGGGAAAACCCTTCTTCTGAGAATGTCATATTCTTGCATGGATTTCTCTGCTCTTCCTCATTTTGGACAAAGACAGTGTTTCCATGTTTTTCTGAAAAAGTGAATCAAAAGTACAGATTGATTGCCATTGATCTGCTGGGATTTGGCAAGAGTCCAAAGCCAAGAGATTGCTCATACACTTTGAAGGATCATGTGGAGATGATTCAGAAATCTGTGGTTCAACCATTGGAGTTGAATAGTTTTCATTTGGTTGCACACTCCATGGGTTGCATAGTTGCATTGGCCTTGGCTGCAAAGTACCCGAAGTGTGTAAAATCAATCACCCTTGCTGCTCCTCCATACACTTCTTCGGAGGGAAATGAAGCTTGTCTAAATGCACTATCAATGCTTGCTGGAAAGAAATTGTGGTCTCCATTGTCATTTGGCTATTCATTCATGTCATGGTATGAGCACTTGGGTCAAATCACAGAATATGGGAGAGCATACTAA 921 0.405 MIRSLLSLAVSSQKWPTNCVPTLISILCCVVFLILDFLDAVFCIIYRFLDERIEGDEASPCCCSSWERQNRIINVTDDDGLSNSLYERKNTFREMGFLQFERKREGSNRKQHGRGGGKLVKRWSDCGCESCLSWMNHGTTDENFRENPSSENVIFLHGFLCSSSFWTKTVFPCFSEKVNQKYRLIAIDLLGFGKSPKPRDCSYTLKDHVEMIQKSVVQPLELNSFHLVAHSMGCIVALALAAKYPKCVKSITLAAPPYTSSEGNEACLNALSMLAGKKLWSPLSFGYSFMSWYEHLGQITEYGRAY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0555 306 PRINTS Alpha/beta hydrolase fold signature 181 196 IPR000073 -
Aed4g0555 306 PRINTS Alpha/beta hydrolase fold signature 241 254 IPR000073 -
Aed4g0555 306 PRINTS Alpha/beta hydrolase fold signature 227 240 IPR000073 -
Aed4g0555 306 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 35 299 - -
Aed4g0555 306 Pfam alpha/beta hydrolase fold 153 262 IPR000073 -
Aed4g0555 306 PANTHER HYDROLASE 35 299 - -
Aed4g0555 306 Gene3D alpha/beta hydrolase 135 293 IPR029058 -
Aed4g0555 306 SUPERFAMILY alpha/beta-Hydrolases 143 265 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0555 Aed-Chr4 4609363 4611020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0555 15 298 Acyl Lipid Metabolism Gene Families AT5G17780 46.488 2.40e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0555 - - gmx:100775258 500.36