Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0551 ATGAGAATGGCGCTATCTTCACCGTGTTGTTGGTGTTATTCTCCTACTCCGCTGCTTCCCTCCAATCTCACTCGGCTCCAACGGCACCGTTTAGTTAGCCTCAAACCCTATCCTCGCCACGCCGCCGCTAAAGCTTCTGCTCCGTTAGTGTACTCCGCCAGACAAGGGTTTGACACCGTCAACATTGCCGAAGATGTCACCCAGTTGATTGGGAATACGCCAATGGTATACCTCAATAATGTTACAGAAGGTTGTGTGGCTAACATTGCTGCCAAACTCGAGTCTATGGAACCTTGCCGAAGTGTCAAGGACAGATTTGAGATATATCATGTATTGACATCTGTTGTTCAAAATGTCAGAATTGGCTATAGTATGTTATCTGATGCTGAAGAGATTGGAGTAATTTCTCCTGGGAAGACCATTTTGGTTGAACCAACTACTGGAAACACAGGACTCGGTATTGCTTTTATTGCAGCAACAAAGGGGTACAAACTTATAGTCACAATGCCTGCTTCCATTAATGTTGAGAGAAGAATCCTTTTACGTGCATTTGGTGCAGAGGTTGTTTTGACTGATGCTGAGAAGGGGCTAAAAGGGGCAGTTGAGAAAGCTGAAGAAATTGTTCGCAGCACACCCAATGCTCACATGTTTCGGCAGTTTGATAACATGACTAATACAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCTTGGGTAATGTTGATGTATTGGTTGCTGGGATTGGAACTGGTGGCACTGTTACCGGCACTGGACGTTATCTGAAAATGATGAACAAAAATATAAAGGTGGTTGGGGTGGAACCTGCAGACAGAAGTGTTGTTTCGGGTGACAGTCCTGGTTTCATGCCAAGCATTTTGGACATCAAACTGCTTGATGAAGTTATCAAGGTTGGGATTTCTTCAGGAGCTGCAGCAGCTGCTGCCATAAATTTAGCAAGACAGCCTGAGAATTCTGGGAAACTTATTGTGGTTATTTTTCCAAGTTTTGGTGAGAGATACATTTCTACTGCTCTCTTTCATTCTATCTACGAAGAGGTTCAGAAAATGTAA 1083 0.4404 MRMALSSPCCWCYSPTPLLPSNLTRLQRHRLVSLKPYPRHAAAKASAPLVYSARQGFDTVNIAEDVTQLIGNTPMVYLNNVTEGCVANIAAKLESMEPCRSVKDRFEIYHVLTSVVQNVRIGYSMLSDAEEIGVISPGKTILVEPTTGNTGLGIAFIAATKGYKLIVTMPASINVERRILLRAFGAEVVLTDAEKGLKGAVEKAEEIVRSTPNAHMFRQFDNMTNTKIHFETTGPEIWEDTLGNVDVLVAGIGTGGTVTGTGRYLKMMNKNIKVVGVEPADRSVVSGDSPGFMPSILDIKLLDEVIKVGISSGAAAAAAINLARQPENSGKLIVVIFPSFGERYISTALFHSIYEEVQKM 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0551 360 Pfam Pyridoxal-phosphate dependent enzyme 66 283 IPR001926 -
Aed4g0551 360 Gene3D - 104 221 IPR036052 -
Aed4g0551 360 Gene3D - 68 304 IPR036052 -
Aed4g0551 360 PANTHER CYSTATHIONINE BETA-SYNTHASE 28 360 - -
Aed4g0551 360 CDD CBS_like 71 346 - -
Aed4g0551 360 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 28 360 - -
Aed4g0551 360 Gene3D - 305 353 IPR036052 -
Aed4g0551 360 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 62 354 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0551 Aed-Chr4 4581442 4587384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0551 58 360 Miscellaneous Gene Families AT3G03630 69.659 2.75e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0551 K22846 - gmx:100816974 558.14