Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0538 ATGGCAATCCTTAAGATAACCAAAAAGCACCATAGGCGTTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCCTATGTCCAAGGTTCTCTCTTTTTCAATTCCAAAAGAGTTCCTTCGGATCAAACCTTCGCAATTGGCAGTGATTTTCAGCTTTCTTGGACCTCCAACAATGGAGGGCGCCTCTCAATTTCGCATCTTTCTCAACAAACCAGACCCATTTGGTCTTCCATTCCAGGACAGTCTTTTGTCTCAGCTGCACAGGTTGACACAGAAGTTGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGACAAAGATGTTCATTTAGTTTGCAATCACCAAACCATTGAGGATATTAGGGTGATTGAAGATGTTCAATTTGATCAACATTTGGAATGTGAAGTTGCAGATTCATTTTATGTGTCACATCGGTTGGAAAAGATAAGTGATGCACAAGAGACTCAGCTTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAGTAAAAAGTTTCAAAAGCATGGCATTGAAGCAACTATGCAGTTTGAGGCAAAAGGATCTTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTGAAGATTGAGAAACCTAACTTCATCTCACGCAACCAGGTATCTAAAAAGGCTTCAGGAGTGTACCAAGGCTTTAAGAGGAGGCTGAGTAATAGGAAAAAGAGATTGGGTTGGTGTTGGTACCTTTCAAGGCCAAGAGGGTTTGTGCTAGTTTCTTCAGTGGAGGAAGAGATGGGAAACTTGGATATCCCAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACATATGCAAGTGATGAGAATGAGAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATAACATCAAAAATGAGGTCTGTCTGCCTTGAAGGATATGATTATACTGTCTTTGATCTTACTAGACTTGACAGAGTACAGATACAGATACATGGAAACTCAGTTGAGGGGCGGATATTGCACGGGAACTCACCTTGTGAACTGATCGAACGTTCCACAGAAAGCATTGGGAGGCTACCTGAGCTTCCAGAGTGGATAATATCAGGTGCCATAGTTGGAATGCAGGGTGGTACAGATGGCGTACGTCATATTTGGGATGAACTAAGGACTTATGATGTTCCTGTCTCAGCTTTTTGGTTGCAGGATTGGGTAGGGCAGAGAGAAACATTGATCGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATGCACAAAGGTATTGTGGATGGAAGGAACTCATCAAAGATCTTAGCTCTCAGAATATAAAAGTTATGACATATTGCAATCCATGTCTAGCTCCGGTTGATGAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTGAAAGACAGCAATGGAAATCCATACATGGTTCCAAACACGGCTTTTGATGTAGGAATGTTAGATCTAACGCACCCAAAAACTGCAATTTGGTTCAAGCAGATTCTACGAGAAATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGCGAGGATCCTATTTCAGCTCATAACAGATACCCTGAACTATGGGCCAAAATTAACAAAGAGCTTGTGGAAGAATGGAAAAGTAACTCCTCAGACCAAGAAGAGGAGGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGTCCTAAGTGGGGGATGCTATTTTGGGAAGGTGACCAAATGGTTAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTCAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGTGGATACTGTACAGTTAACTTACCTATAGTTAAATATAGAAGAACTGAAGAATTGCTTTTAAGATGGATGGAGCTAAATTCTTTTACCACAGTCTTCCGCACCCATGAAGGAAACAAGCCATCATGCAACAGCCAGTTTTACTCAAACCAACAAACAATGTCACACTTTGCACGATCTGCAAAAATATACAAAGCATGGAAATTTTACCGAATTCAACTGGTGAAGGAAGCTGCACAGAAAGGATTGCCTGTGTGCCGCCATCTATTTCTCCATTACCCAGATGACAAACGTGTCCATTGTTTGAGTTATCAGCAGTTCCTGGTTGGTTCTGAGTTCCTAGTGGTGCCTGTCCTTGACAAAGGAAAGAAGAAAGTTAAAGCTCATTTTCCATTGGGAGAGAGTAGCAGTTGGATCCATATTTGGACAGGAAAAGTATTTTCCAAACAAGGACGTGAAGAATGGGTGGAAGCTCCAATAGGATACCCTGCTGTATTTGTTAAGGTTGGCTCCTTTGTTGGAGAAACCTTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2490 0.4169 MAILKITKKHHRRFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFAIGSDFQLSWTSNNGGRLSISHLSQQTRPIWSSIPGQSFVSAAQVDTEVEESRGSFLVKDKDVHLVCNHQTIEDIRVIEDVQFDQHLECEVADSFYVSHRLEKISDAQETQLPTLMITGRLFNMTKKSKKFQKHGIEATMQFEAKGSSVYARYWVLFNQKTNHEVGFQVKIEKPNFISRNQVSKKASGVYQGFKRRLSNRKKRLGWCWYLSRPRGFVLVSSVEEEMGNLDIPKPEEFNRVWLTYASDENERAGGDWSTTYAPSPFYITSKMRSVCLEGYDYTVFDLTRLDRVQIQIHGNSVEGRILHGNSPCELIERSTESIGRLPELPEWIISGAIVGMQGGTDGVRHIWDELRTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDAQRYCGWKELIKDLSSQNIKVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTAIWFKQILREMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINKELVEEWKSNSSDQEEEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRTEELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNQQTMSHFARSAKIYKAWKFYRIQLVKEAAQKGLPVCRHLFLHYPDDKRVHCLSYQQFLVGSEFLVVPVLDKGKKKVKAHFPLGESSSWIHIWTGKVFSKQGREEWVEAPIGYPAVFVKVGSFVGETFLNNLRSLGIL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0538 829 CDD GH31_N 284 369 - -
Aed4g0538 829 Gene3D - 758 810 IPR013780 -
Aed4g0538 829 Gene3D Glycosidases 356 757 - -
Aed4g0538 829 PANTHER SULFOQUINOVOSIDASE 29 297 - -
Aed4g0538 829 PANTHER SULFOQUINOVOSIDASE 296 827 - -
Aed4g0538 829 Coils Coil 466 486 - -
Aed4g0538 829 Gene3D glycosyl hydrolase (family 31) 280 353 - -
Aed4g0538 829 CDD GH31_glucosidase_YihQ 369 703 IPR044112 -
Aed4g0538 829 SUPERFAMILY (Trans)glycosidases 360 724 IPR017853 -
Aed4g0538 829 SUPERFAMILY Glycosyl hydrolase domain 726 810 - -
Aed4g0538 829 Pfam Glycosyl hydrolases family 31 352 813 IPR000322 GO:0004553|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0538 306 801 Glycoside Hydrolase AT3G45940 24.060 4.33e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0538 - - gmx:100779005 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0538 4 4458937 4464279 Aed4g0538 4 4458937 4464279 ECH