Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0534 ATGGACACCATTCGCAGTAGCAGCGTGCAACAAAGAACCGCCACAAAGAAAACGAAGGCGAAGAAAAAGAACAGTGCTACCCCTCACCCAGTGAAGGTAGTGTACATATCCAACCCCATGAAGATCAAGACCAGCGCTTCCGAGTTTAGGGCTTTGGTGCAAGAGCTCACCGGCCAGGACGCCGACTCCTCCCCAGATCCCGCCCGATTCCTCGCCCTCCACCCCGATTCCTCCTCCTCTGGATCCGACGACTTGTCCCTCAAGAACATCATCGAGGACAATGTCCACCGTGTCGTCGCGCCTCTTCCCGCGGCCGTCGTTGCTGATCCCAACGACGACTGCGGGACAGCGCAACAACAGCTCTCCATCGAATCCATCCAATCGATGGAGAGCTGTTTTGCTCCGCTGGACGACGACGTTTTCACGCCCCAGATGATAGAGAACATTTCCGCCGCCCTGCTCCCAGCAAGTGTATTTTATGAATCGCCCCACCTTAGCCACTGGTGA 507 0.5621 MDTIRSSSVQQRTATKKTKAKKKNSATPHPVKVVYISNPMKIKTSASEFRALVQELTGQDADSSPDPARFLALHPDSSSSGSDDLSLKNIIEDNVHRVVAPLPAAVVADPNDDCGTAQQQLSIESIQSMESCFAPLDDDVFTPQMIENISAALLPASVFYESPHLSHW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0534 168 MobiDBLite consensus disorder prediction 57 83 - -
Aed4g0534 168 Pfam VQ motif 36 62 IPR008889 -
Aed4g0534 168 MobiDBLite consensus disorder prediction 1 31 - -
Aed4g0534 168 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 1 165 IPR039335 GO:0051091
Aed4g0534 168 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0534 Aed-Chr4 4385444 4385950 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0534 - - gmx:102661022 167.162