Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0529 ATGGCGCTGCACTCCGTTTCCTCCGTTTCGCACGTGCTGCGCCTCGCCGAGCCATTCCCTTCCCTCCATAACGCTCACGTGCTCCTCGACCTCGCTCCTCTCCGCCGCAAACCAAAGCGCCGCACTCGCAAACTCACGGCGTTTCCCTCGCCGTCGCCGTTCCGTCATTCCTCCGCCGTCAAAGCCGTTCTCCACCTTGACCGCTCCACCGACAATCCCCGTCAAAATTCGTCTGCTTCCGATACCAAACCACAGGTTGCAAACTTGGAGGACATATTATCAGAGAGAGGAGCCTGTGGGGTTGGATTCATTGCCAATTTGGAGAATAAGGGATCACATGAGATTGTCAAGGATGCTTTAAATGCTTTAAGTTGTATGGAACATCGTGGTGGCTGTGGAGCAGATAATGACTCTGGCGATGGTTCAGGGCTGATGACTGGAGTTCCATGGGATCTATTTGACAATTGGGCCAACATGCAAGGGATTGCTTCCTTTGATAAGTTGCACACTGGTGTTGGAATGGTTTTCTTACCCAAAGATGAACAACTTCTCAATGAGGCGAAGAAAGTTATTGTAAATATTTTTCAGCAAGAAGGTCTTGAGGTTCTTGGTTGGAGGCCTGTCCCTGTAAATACTTCTGTAGTAGGTTATTATGCGAAGGAGACCATGCCCAATATACAACAGGTATTTGTTAAGATTGTGAAAGAAGAAAATGTCGATGACATTGAACGAGAACTGTACATCTGTCGGAAATTGATTGAAAAAGCAGTAAGCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCCAATCAAACCATAGTTTACAAGGGGATGCTTCGCTCAGAAGTGCTTGGGTTATTTTATTCTGACCTTCAAAATGATCTTTATAAATCCCCTTTTGCCATTTATCATCGAAGGTACAGCACAAATACTAGTCCTAGATGGCCTCTTGCACAACCGATGAGGCTTCTTGGTCATAATGGAGAGATCAACACCATACAGGGTAACTTAAATTGGATGCAATCACGAGAACCTTCATTGAAGTCACCTGTATGGCGCGGTCGTGAAAATGAAATTCGTCCTTATGGAAATCCAAAGGCATCAGACTCGGCAAATCTTGACAGTACTGCAGAATTAATGATAAGAAGTGGTCGAAGTCCTGAGGAAGCTATGATGATTCTTGTTCCAGAGGCCTATAAAAATCATCCTACACTGTCAATCAAATATCCTGAGGTTGGTGTTGTGCCTGTCGATGAGTCAAAGGTTGTCTTGAAAGGCCGTTTGGGTCCAGGCATGATGATAACAGTTGATTTACCTGGTGGTCAGGTCTATGAGAATACAGAGGTTAAAAAACGAGTAGCCTTATCAAGCCCATATGGGAACTGGATCAAGGAAAATTTGCGGTCCTTGAAGCCTGGGAACTTCCTTTCAGCCTCTGTGATGGAGAATGAGGCAGTATTAAGACACCAACAGGCATTTGGGTACTCTAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTGCTCAAGGAAAGGAGCCCACGTTTTGCATGGGAGATGATATTCCATTGGCAGCATTGTCTCAGAAACCTCACATGCTTTTTGATTATTTCAAGCAACGGTTTGCACAGGTTACAAATCCTGCAATTGATCCTCTTCGAGAAGGATTGGTTATGTCTCTTGAAGTGAATATAGGGAAGAGAAGGAATATATTGGGAATTGGGCCAGAGAATGCTTCACAGGTTATGTTATCTAGTCCAGTGTTGAATGAAGGGGAGCTTGAGTCATTACTAAAAGACTCCCACTTAAAACCACAAGTATTACCTACATTTTTTGATATATCTAAGGGCATTGAAGGTTCCTTGGAGAAAGCATTAAATAAGCTTTGTGAAGCTGCAGATGAAGCTGTCAGAAATGGTTCCGAGCTACTTATTCTCTCAGACCGTTCAGAAGCACTGGAACCAACTCATCCGGCAATACCTATACTTCTTGCTGTCGGTACGGTTCATCAGCATCTAATCCAGAATGGCCTGCGAATGTCAGCTTCAATTGTAGCAGATACTGCTCAGTGCTTTAGCACTCACCAGTTTGCCTGTTTAATAGGATATGGTGCAAGTGCTGTGTGTCCTTACTTGGCATTGGAGACATGTCGGCAGTGGCGTTTGAGTAATAAAACTGTAAATCTGATGAGGAATGGAAAGATGCCTACTGTATCGATTGAACAGGCACAGAAGAATTATTGCAAGGCTATAAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATGGGCATCTCATTGCTGTCAAGTTATTGTGGTGCACAAATATTTGAAGTCTATGGATTAGGGAAGGAACTTGTTGATGTTGCATTCAGAGGAAGTGTATCGAAAATTGGTGGATTAACTTTTGATGAGGTAGCAAGAGAGAGTTTGTCTTTCTGGGTGAAGGCATTCTCTGAAGATACAGCTAAAAGATTGGAAAATTTTGGATTTATACAGTTCAGACCAGGAGGGGAGTATCATGCAAATAACCCAGAAATGTCAAAGTTGCTCCACAAAGCTGTTCGTCAGAAAAGTCAAAGTGCCTTTTCAGTTTATCAGCAATATTTGGCTAATCGACCTGTTAATGTTCTCCGTGATCTTCTTGAATTCAGAAGTGATCGTGCTCCAATACCTGTGGGGAAGGTTGAACCTGCTTCTTCTATTGTTCAACGGTTTTGCACTGGGGGCATGTCACTTGGAGCTATTTCCAGAGAAACTCATGAGGCAATTGCAATAGCCATGAACAGATTAGGTGGAAAATCTAATTCAGGGGAAGGTGGGGAGGATCCTATTCGCTGGAAACCACTTACAGATGTTGTAGATGGTTACTCTCCAACTCTTCCACACCTTAAAGGTCTTCAAAATGGGGATACTGCAACTAGTGCCATCAAGCAGGTCGCTTCAGGAAGGTTTGGTGTCACTCCAACATTCTTGGCAAATGCTGATCAGTTAGAAATCAAGATTGCACAAGGTGCAAAACCTGGTGAAGGTGGACAATTGCCTGGAAAAAAAGTTAGCATGTATATTGCAAGGTTGAGAAATTCTAAACCAGGAGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGACCTTGCTCAGTTGATCTTTGATCTTCATCAGGTGAACCCTAGGGCCAAGGTGTCAGTAAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGGGTTGCAAAGGGCAATGCTGATATTATACAGATTTCAGGACATGATGGGGGAACAGGAGCAAGCCCTATAAGTTCCATCAAGCATGCAGGAGGTCCTTGGGAACTTGGGCTTACAGAATCTCACCAGACACTCACTGAAAATGGACTTAGAGAAAGGGTTATTCTCAGAGTTGATGGTGGATTTAGAAGTGGAGTAGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGGTTCGGTTCAGTGGCAATGATTGCTACTGGATGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGCTTTCCTGGTGTTCCTGGGGATCTTGTCAACTACTTTTTGTATGTAGCTGAGGAGATAAGAGGCATATTGGCACAGCTGGGGTATGAGAAGTTGGATGATGTGATTGGCCGGACTGACTTGTTGCAACCAAGAGACATATCTCTAGCAAAAACTCAGCATCTAGATCTGAGTTATATCCTCTCTAATGTTGGGTTGCCTAAATGGAGCAGCACAGAAATTAGGAATCAGGAGCCTCATACCAATGGTCCTGTTCTGGATGATGTTTTGCTAGCAGACCCAGAGGGAGAGGATTTGAACCCATTACCTCCTTGTCACTCCAACCTCTGTGTTCCTTTCCCAAACTCCATTCTTTTAAATGTGACTTTGCTAGAATCTGTTAAATATTCTGTCAAGTGTAAATCAAAATTAGTTTTCCAGAAGTGA 4020 0.4371 MALHSVSSVSHVLRLAEPFPSLHNAHVLLDLAPLRRKPKRRTRKLTAFPSPSPFRHSSAVKAVLHLDRSTDNPRQNSSASDTKPQVANLEDILSERGACGVGFIANLENKGSHEIVKDALNALSCMEHRGGCGADNDSGDGSGLMTGVPWDLFDNWANMQGIASFDKLHTGVGMVFLPKDEQLLNEAKKVIVNIFQQEGLEVLGWRPVPVNTSVVGYYAKETMPNIQQVFVKIVKEENVDDIERELYICRKLIEKAVSSESWGNELYFCSLSNQTIVYKGMLRSEVLGLFYSDLQNDLYKSPFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMQSREPSLKSPVWRGRENEIRPYGNPKASDSANLDSTAELMIRSGRSPEEAMMILVPEAYKNHPTLSIKYPEVGVVPVDESKVVLKGRLGPGMMITVDLPGGQVYENTEVKKRVALSSPYGNWIKENLRSLKPGNFLSASVMENEAVLRHQQAFGYSSEDVQMVIESMAAQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRRNILGIGPENASQVMLSSPVLNEGELESLLKDSHLKPQVLPTFFDISKGIEGSLEKALNKLCEAADEAVRNGSELLILSDRSEALEPTHPAIPILLAVGTVHQHLIQNGLRMSASIVADTAQCFSTHQFACLIGYGASAVCPYLALETCRQWRLSNKTVNLMRNGKMPTVSIEQAQKNYCKAIKAGLLKILSKMGISLLSSYCGAQIFEVYGLGKELVDVAFRGSVSKIGGLTFDEVARESLSFWVKAFSEDTAKRLENFGFIQFRPGGEYHANNPEMSKLLHKAVRQKSQSAFSVYQQYLANRPVNVLRDLLEFRSDRAPIPVGKVEPASSIVQRFCTGGMSLGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPRAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLTENGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEIRGILAQLGYEKLDDVIGRTDLLQPRDISLAKTQHLDLSYILSNVGLPKWSSTEIRNQEPHTNGPVLDDVLLADPEGEDLNPLPPCHSNLCVPFPNSILLNVTLLESVKYSVKCKSKLVFQK 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0529 1339 CDD GltS_FMN 846 1241 IPR002932 GO:0006537|GO:0015930|GO:0016638
Aed4g0529 1339 Pfam Glutamate synthase central domain 492 784 IPR006982 GO:0006807|GO:0015930
Aed4g0529 1339 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 414 1293 - -
Aed4g0529 1339 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 71 415 - -
Aed4g0529 1339 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 99 410 IPR029055 -
Aed4g0529 1339 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 414 1293 - -
Aed4g0529 1339 Pfam Conserved region in glutamate synthase 843 1227 IPR002932 GO:0006537|GO:0015930|GO:0016638
Aed4g0529 1339 Pfam Glutamine amidotransferases class-II 414 465 IPR017932 -
Aed4g0529 1339 Pfam Glutamine amidotransferases class-II 99 409 IPR017932 -
Aed4g0529 1339 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 411 477 IPR029055 -
Aed4g0529 1339 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 99 484 IPR017932 -
Aed4g0529 1339 Gene3D Aldolase class I 830 1281 IPR013785 -
Aed4g0529 1339 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 99 469 IPR029055 -
Aed4g0529 1339 CDD GltS 99 457 - -
Aed4g0529 1339 Gene3D Aldolase class I 478 829 IPR013785 -
Aed4g0529 1339 SUPERFAMILY FMN-linked oxidoreductases 487 1265 - -
Aed4g0529 1339 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 71 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0529 Aed-Chr4 4320986 4349553 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0529 K00284 - gmx:100809299 2340.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0529 4 4320986 4349553 Aed4g0529 4 4320986 4349553 ECH