Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0516 ATGGGTGGGTCATCGGAGGATTTCTCGGTGGTGGTGTTGGCGTCGGACCTCGGCGTCGATGCGCGACCCTTCCTCGAACACGACCAACAGCAACAGCAACAACAAGAAGAAGAGAATTGGCACGACTGTTCCCAATTTCTCTCTCCCGACGAAGACTTCTCCGATCTCGATCAATTGCAATTCCTCCGCCTCCAAGGCTCCGACAAAAACTCCAATCGCATTCTCCGCATCGTCGGAAAGTACTTTCCGGAGCGGCTGAAGAGGTACGTGCTTCACAAAATTTGCAGTGAGTTGCCAGAGGGGCTATTCTGTATTGTTTACATGCACACCACCGCTCAGCAGGAGGATAATTCCCCTGGCATGACCATCTTGAGATGGATCTATGAAGAACTTCCTGCTGATTTCAAAGACAGGCTTCAAACTGTGTATTTCATCCACCCTGGCCTTCGCTCCCGCTTAGTCATCGCTACTCTTGGCCGCTTTTTCTTGAGTGGAGGATTATATTGGAAGATCAAGTATGTAAGCCGTCTGCAGTACCTTTGGGATGATATAAAGAAAGGAGAGATTGAGATACCGGATTTTGTGAAAAGTCATGATGATATCCTTGAGAATAGACCACTCACAGATTATGGCATTGAACCTGACCCCTTTCACTTGACTGGGATACCTTCAGCTACATACTCATTTGGAAAGTACGAGGAGAGATGGGCAGGAAGGAATTATGTGTCTTAG 732 0.4795 MGGSSEDFSVVVLASDLGVDARPFLEHDQQQQQQQEEENWHDCSQFLSPDEDFSDLDQLQFLRLQGSDKNSNRILRIVGKYFPERLKRYVLHKICSELPEGLFCIVYMHTTAQQEDNSPGMTILRWIYEELPADFKDRLQTVYFIHPGLRSRLVIATLGRFFLSGGLYWKIKYVSRLQYLWDDIKKGEIEIPDFVKSHDDILENRPLTDYGIEPDPFHLTGIPSATYSFGKYEERWAGRNYVS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0516 243 Gene3D - 50 190 IPR036865 -
Aed4g0516 243 Pfam Divergent CRAL/TRIO domain 73 199 IPR001251 -
Aed4g0516 243 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 3 242 - -
Aed4g0516 243 SUPERFAMILY CRAL/TRIO domain 66 188 IPR036865 -
Aed4g0516 243 SMART sec14_4 55 200 IPR001251 -
Aed4g0516 243 PANTHER OS01G0948300 PROTEIN 3 242 - -
Aed4g0516 243 CDD SEC14 50 196 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0516 Aed-Chr4 3950688 3952926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0516 - - gmx:100810365 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0516 4 3950688 3952926 Aed4g0516 4 3950688 3952926 ECH