Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0514 ATGATACTTATGGATACTTTGCTCAAAACACCTAACAAGCTTCAGTTTTTGCACCCACTTCACGGTTACTCTGAAAAATTGAGCAATTCAGCCTCCTCTAGGCTGCAAAATCAGGATTTTAGGTTTGGTTGTTCCAAGAAACCACTTGTGAGGTGGGGTAAATGTGGTAACTTGAGGGCTGGCAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATGCTTCAAAGGGTGCTGTGGTTGACCTTGCTGTTGTGGGAGGGGGTCCTGCAGGGCTTGCGGTTGCACAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCCATTGATCCAAACCCCAGGTTGATTTGGCCTAATAATTATGGGGTTTGGGTGGATGAGTTTGAGGCCATGGACTTGCTTGATTGCCTTGACACCACTTGGTCTGGCGCCATCGTCTTCGTCGACGACAAAACAAAGAAGGATCTAGATAGGCCTTATGGGAGGGTCAATAGGAAGCTGCTCAAGTCGAAGATGCTGCAGAAATGCATATCGAACGGCGTCAAGTTTCACCAAGCCAAAGTTATCAAGGTTATTCATGAGAATTCCAAATCCTTGCTGATTTGTAATGATGGTGTCACTGTTCAGGCTACTGTGGTTCTTGATGCAACTGGCTTTTCAAGATGCCTTGTTCAGTATGATAAGCCGTACAATCCGGGTTACCAAGTTGCTTATGGGATTCTGGCCGAGGTTGATGAACACCCGTTTGATGTAGATAAAATGCTTTTCATGGACTGGAGAGATTCACATCTAGACAATAACATGGAGCTGAAGCAGAGAAATAGTAGAATACCCACTTTTCTCTATGCAATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACTTCTCTTGTGGCACGCCCTGGGTTACGTATGGAGGATATACAGGAAAGAATGGTTGCTAGGTTGAAACACTTGGGAATTAGAGTGAAAAGCATTGAAGAAGATGAGCAGTGTGTGATTCCCATGGGAGGCCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGCATTGGAGGTACCGCTGGAATGGTGCATCCTTCAACTGGGTATATGGTGGCAAGGACCCTGGCTGCAGCTCCTATTGTTGCTAATTCTATTGTTCAGTACCTTGGTTCTGATAGAGGCTTTACAGGAGGTGAAATATCTGCACAGGTGTGGAAGGATTTATGGCCTATCGAACGGAGGCGGCAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAGCTTGATTTACCAGGCACAAGGAGATTTTTTGATGCGTTTTTTGATCTGGAACCTCATTACTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAGCTCTTATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAATAA 1527 0.442 MILMDTLLKTPNKLQFLHPLHGYSEKLSNSASSRLQNQDFRFGCSKKPLVRWGKCGNLRAGSSALLELVPEFKKENLDFELPLYDASKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAIVFVDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHENSKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDNNMELKQRNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMEDIQERMVARLKHLGIRVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSDRGFTGGEISAQVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSYASNTSRIEIMAKGTLPLVNMINNLVKDTE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0514 508 Pfam Lycopene cyclase protein 93 485 - -
Aed4g0514 508 SUPERFAMILY FAD/NAD(P)-binding domain 92 475 IPR036188 -
Aed4g0514 508 Gene3D - 90 427 IPR036188 -
Aed4g0514 508 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 508 - -
Aed4g0514 508 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 508 - -
Aed4g0514 508 TIGRFAM carotene-cycl: lycopene cyclase family protein 93 488 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0514 Aed-Chr4 3948424 3949950 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0514 K06443 - gmx:100810895 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0514 4 3948424 3949950 Aed4g0514 4 3948424 3949950 ECH