Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0510 ATGGCAGAGAATGCGTTGGAGTGGGTGAGAGTGGGAGGAGGTGAAGAAGAAGAAGCAGAAGAAGCGAAAGGGTGTTTGAGCAAGTTCATCGACGATGGAAGCGTGGAGAGTCACAGATACTACTTGTCTCGCAGAACCACTCTCGAAATGCTCAAAGACAGAGGCTACTCCATACCCTCTCACGAAATCGACCTTTCCATCTCCGATTTCCGCGACATGCATGGCCAATCCCCCGACCCTGATCGCCTCCGCCTCTCCCTCACTCATGCCACCAACCCTTCCAAAAGGGTTTTAGTCATTTTCTGTGGACCAGGTGTTGTGAAAGTTACTGCCATTCGGAACATTGGGGGGCAGATTATTAATAGAGAATCTTTGACTGGCATCATATTGATAGTGGAGAATCATATTACTAGCCAGGCCTTGAAAGCAGTCGATCTTTTCAACTTCAAGGTTGAAATTTTCCAGATCACGGACTTGCTCGTTAATATTACAAAGCATGTATTGAAGCCAAAGCATCAGGTGCTGACTGATAAGCAGAAGAAAAATCTCCTGAAGAAGTACAATATTGAAGAAAAGCAGCTTCCCCGCATTCTACAGACAGATGCAATTGCAAGATATTATGGACTTCAGAGGGGCCAAGTAGTTAAAGTTACCTATGGTGGTGAAGTCACCCAGATGCATGTCACATATCGATGTGTCTGGTGA 705 0.4582 MAENALEWVRVGGGEEEEAEEAKGCLSKFIDDGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSISDFRDMHGQSPDPDRLRLSLTHATNPSKRVLVIFCGPGVVKVTAIRNIGGQIINRESLTGIILIVENHITSQALKAVDLFNFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIEEKQLPRILQTDAIARYYGLQRGQVVKVTYGGEVTQMHVTYRCVW 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0510 234 Gene3D - 159 234 IPR035913 -
Aed4g0510 234 SUPERFAMILY RPB5-like RNA polymerase subunit 159 234 IPR035913 -
Aed4g0510 234 Gene3D - 31 158 IPR036710 GO:0003677|GO:0003899|GO:0006351
Aed4g0510 234 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 16 234 - -
Aed4g0510 234 Pfam RNA polymerase Rpb5, N-terminal domain 36 116 IPR005571 GO:0003677|GO:0003899|GO:0006351
Aed4g0510 234 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 16 234 IPR014381 -
Aed4g0510 234 Pfam RNA polymerase Rpb5, C-terminal domain 161 233 IPR000783 GO:0003677|GO:0003899|GO:0006351
Aed4g0510 234 PIRSF RPB5 29 234 IPR014381 -
Aed4g0510 234 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 34 162 IPR036710 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0510 Aed-Chr4 3929333 3932388 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0510 K03013 - gmx:100306033 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0510 4 3929333 3932388 Aed4g0510 4 3929333 3932388 ECH