Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0508 ATGTTTTCTTCTGCAATTTCTCCGAAGCCCTTCCTTCAGTCCCTCGTCATTGATCGTTACGCTCAGAGCACAACTGCTGCAACCAGGTGGGAGAGCTTGGGGTTTAGCAAGTCAGAAAATTTCAGTACCAAGAGAGTGTTGTGTTCAGAGGGATTCAAGCTGAATTGCTTGGTTGATAATAGAGAGATGGATGTGGAGTCATCATCATTATCATCTTTGGCAGATGGTGCTTCCATGAGCTTAAGTGAAGAGGATTTAGTGGAGCCTAGTATTTCAACAATGGTGATGAATTTTGAGAGCAAGTTTGATCCTTTTGGAGCAATTAGTACCCCGCTTTACCAAACGGCTACTTTTAAGCAGCCTTCTGCAACAGAAAACGGTCCCTATGACTATACCAGAAGTGGAAATCCTACTCGAGATGCTTTAGAAAGTTTACTAGCAAAGCTTGATAAAGCAGATAGAGCCCTGTGCTTCACCAGTGGAATGGCTGCTTTGAGTGCTGTTGTTCGTCTTGTTGGAACTGGTGAGGAAATTGTTGCTGGAGATGATGCATATGGTGGCTCAGATAGGTTGCTGTCTCAAGTAGTTCCAAGGACTGGAATTGTGGTGAAACGGGTAAATACATGTGATCTAAATGAGGTTGCAGCAGCCATTGGACCCAGGACTAAGCTTGTGTGGCTTGAGAGTCCAACCAATCCTCGGCTACAAATTTCTGATATTCGAAAAATATCAGAGTTGGCTCATTCACATGGTGCACTTGTGTTAGTGGACAATAGTATAATGTCACCTGTGTTGTCTTGGCCATTGGAACTTGGAGCAGATATTGTCATGCACTCAGCTACAAAATTTATTGCTGGACATAGTGACATTATGGCTGGTGTGCTTGCTGTGAAGGGTGAAAAGTTGGGAAAGGAATTGTATTTCTTGCAAAATGCAGAGGGTTCAGGCTTAGCACCATTTGACTGTTGGCTTTGTTTGCGAGGAATCAAGACCATGGCCCTGCGAGTTGAAAAGCAACAGGATAATGCACAGAAGATTGCTGAGTTCCTTGCCTCCCATACTCGAGTGAAGAAAGTGAATTATGCTGGCTTGCCTGGTCATCCTGGTCGCGATTTACACTATTCTCAGGCAAAAGGTGCAGGATCTGTGCTTAGCTTCTTGACTGGTTCATTGACACTTTCAAAGCATATTGTTGAAACTACCAAATACTTCAGTATAACCGTCAGTTTTGGGAGTGTGAAGTCCCTGATAAGCATGCCATGCTTTATGTCACATGCAAGCATACCTGCCGCAGTTCGTGAGGCCAGGGGTTTAACTGAAGATCTTGTACGTATATCTGTGGGAATTGAGGATGTGAATGATCTCATTGCTGATCTAGACAATGCACTTAGAACTGGACCTCTTTAA 1407 0.4385 MFSSAISPKPFLQSLVIDRYAQSTTAATRWESLGFSKSENFSTKRVLCSEGFKLNCLVDNREMDVESSSLSSLADGASMSLSEEDLVEPSISTMVMNFESKFDPFGAISTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALSAVVRLVGTGEEIVAGDDAYGGSDRLLSQVVPRTGIVVKRVNTCDLNEVAAAIGPRTKLVWLESPTNPRLQISDIRKISELAHSHGALVLVDNSIMSPVLSWPLELGADIVMHSATKFIAGHSDIMAGVLAVKGEKLGKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQDNAQKIAEFLASHTRVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLTLSKHIVETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLIADLDNALRTGPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0508 468 Pfam Cys/Met metabolism PLP-dependent enzyme 93 463 IPR000277 GO:0019346|GO:0030170
Aed4g0508 468 CDD CGS_like 106 464 IPR000277 GO:0019346|GO:0030170
Aed4g0508 468 PANTHER BNAC04G24570D PROTEIN 33 468 - -
Aed4g0508 468 Gene3D Aspartate Aminotransferase, domain 1 332 465 IPR015422 GO:0003824
Aed4g0508 468 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 92 465 IPR006238 GO:0004121|GO:0071266
Aed4g0508 468 Gene3D - 90 331 IPR015421 GO:0003824
Aed4g0508 468 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 33 468 IPR000277 GO:0019346|GO:0030170
Aed4g0508 468 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 274 288 IPR000277 GO:0019346|GO:0030170
Aed4g0508 468 SUPERFAMILY PLP-dependent transferases 103 464 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0508 Aed-Chr4 3891269 3897286 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0508 K01760 - gmx:100786470 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0508 4 3891269 3897286 Aed4g0508 4 3891269 3897286 ECH