Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0497 ATGAAGTTCATAAGCAGCATCAACCCCAAAAACCTTAAACTCAGTCCAAAACGCTTCTTTCGTAAAAAGGAACGATCTTTAGTCTCACGCTCCGACCCGCCTTCATTCGGATCCGGATCCTCCTCCGACGAGTCTATCACCGCCCACAAACCCGTCGCCGGTAACCAGACTCCGACCAGCGTTCTCCCGGATGTTTCCGGCGAGTTGTCCGACGGGGCCACCGTGGACGTGCGGTGGGACCTTGCTCAGGCCTTCCGCCTCATCGACCACGACAACGACGGCGTCGTCACGCGCCAGGACCTCGAGGCCCTCCTCACGCGCATCGGCGCGTCCGACGTCGCGCTCATGCTCAGCGATTTCGACGGCGGCGACAGCGGTGAAATCACCGTGGAGTCCCTCATGAGCCACATCGGGTCGGGTCTCGAAACCGGGTCGGATCCGGACGAGCTGAAAGAGGCGTTCGAGGTTTTCGACACGGATCGCGACGGGAGGATCTCGGCGGAGGAGCTGCTGAGGGTGTTCAAAGCCATTGGGGACGAGCGGTGCACATTGGCAAAGAAAGAAACTCAAAACGTAATCTTAAATGGCTATCAGCTCTGA 600 0.5867 MKFISSINPKNLKLSPKRFFRKKERSLVSRSDPPSFGSGSSSDESITAHKPVAGNQTPTSVLPDVSGELSDGATVDVRWDLAQAFRLIDHDNDGVVTRQDLEALLTRIGASDVALMLSDFDGGDSGEITVESLMSHIGSGLETGSDPDELKEAFEVFDTDRDGRISAEELLRVFKAIGDERCTLAKKETQNVILNGYQL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0497 199 SUPERFAMILY EF-hand 75 179 IPR011992 -
Aed4g0497 199 ProSiteProfiles EF-hand calcium-binding domain profile. 80 111 IPR002048 GO:0005509
Aed4g0497 199 MobiDBLite consensus disorder prediction 31 62 - -
Aed4g0497 199 CDD EFh 80 175 IPR002048 GO:0005509
Aed4g0497 199 ProSiteProfiles EF-hand calcium-binding domain profile. 145 180 IPR002048 GO:0005509
Aed4g0497 199 Pfam EF-hand domain pair 81 174 IPR002048 GO:0005509
Aed4g0497 199 MobiDBLite consensus disorder prediction 23 62 - -
Aed4g0497 199 Gene3D - 75 135 - -
Aed4g0497 199 PANTHER CALCIUM-BINDING PROTEIN CML35-RELATED 1 185 - -
Aed4g0497 199 Gene3D - 145 181 - -
Aed4g0497 199 ProSitePatterns EF-hand calcium-binding domain. 158 170 IPR018247 -
Aed4g0497 199 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 185 - -
Aed4g0497 199 ProSitePatterns EF-hand calcium-binding domain. 89 101 IPR018247 -
Aed4g0497 199 SMART efh_1 149 177 IPR002048 GO:0005509
Aed4g0497 199 SMART efh_1 80 108 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0497 Aed-Chr4 3805384 3806333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0497 1 184 EF-hand Containing Proteins AT2G41410 47.917 1.15e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0497 K13448 - gmx:100815559 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0497 4 3805384 3806333 Aed4g0497 4 3805384 3806333 ECH