Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0492 ATGGGATCCGAAACACACTCTCAACTTCATGTGGTGGACTTCACCGATGAAAACATGAAGCCTGGCACCGATGCATGGCTCTCAGCATGCAATGTTGTGAGGACTGAACTTGAGGACAACGGTTTTTTCATGGCACGTTATGATAAAGTTGGCAAAGAGATTTGCGACTCTGTTGTATCTGCAGTGGAAGAGTTATTCATTCTCCCTGTGGAGACAAAAGCACAGAAGACCAGTGAGAAACTTTTCCATGGCTACTTAGGGCAAGTCCCGTGGATTCCCTTGTATGAATCTCTCGGCATTGATGATCCCTTGACCTTGCAAGGATGCCATAAATTCGCCCAAATTATGTGGCCTGAGGGGAATCATCGTTTCAGTGAAAGCATGAATGAGTATGCAAAGTTGTTGGGAGAACTAGACCGTATGTCGAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGCAACAATGCGATTCTTTCATGGAATCAAGTGCTTATATGCTTCGATGCATGACATATAGAACACCTGAGATGGATGAAAGCGATGTGGGACTGCAACCTCACTCGGACATGACCATCACATCCATTCTACATCAGCTGAATAACTTGAATGGCCTGGAAATCAAACTCAAGGATGGGGAATGGAGAGGGATTGATGCCTCATCACCCTCTTTGTTTGTGGTTATGGCAGGTGATGCATTCAATGTGTGGAGTAATGGGAGGATACGAGCATGTGAACATAGAGTTACAATGAATGCAAAGAAAAGGAGATACTCTATGGGTTTGTTTTCTTTTGGTGACAATAATAAGATGTTGCGTATACCAGATGAGCTAGTGAATGAGCAACACCCCTTGCGTTATAAACCCATATTCGACCATTCTGAATACCTCCGTTTCTTTGAGAAAGAGAAAATCAAAGAGACTTATTCTCGAATCCAAGCCTTCTGTGGAATCCAAGAAGAAGGAAATTATGTATAA 978 0.4315 MGSETHSQLHVVDFTDENMKPGTDAWLSACNVVRTELEDNGFFMARYDKVGKEICDSVVSAVEELFILPVETKAQKTSEKLFHGYLGQVPWIPLYESLGIDDPLTLQGCHKFAQIMWPEGNHRFSESMNEYAKLLGELDRMSKRMVFESYGVDMQQCDSFMESSAYMLRCMTYRTPEMDESDVGLQPHSDMTITSILHQLNNLNGLEIKLKDGEWRGIDASSPSLFVVMAGDAFNVWSNGRIRACEHRVTMNAKKRRYSMGLFSFGDNNKMLRIPDELVNEQHPLRYKPIFDHSEYLRFFEKEKIKETYSRIQAFCGIQEEGNYV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0492 325 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 266 IPR005123 -
Aed4g0492 325 Pfam 2OG-Fe(II) oxygenase superfamily 176 264 IPR044861 -
Aed4g0492 325 SUPERFAMILY Clavaminate synthase-like 7 304 - -
Aed4g0492 325 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 317 - -
Aed4g0492 325 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 317 - -
Aed4g0492 325 Gene3D - 7 323 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0492 Aed-Chr4 3767465 3768971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0492 126 288 Glycosyltransferase AT5G59530 27.545 5.90e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0492 - - gmx:100775440 566.614