Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0485 ATGGCTATGTTGTTGTCTACAATCGTTGTTCCTTCTACCAAGCTTATCATCTTCAACAACAACAACAACACGCAAGAGCGTGCAATTCCAAATTCTCTTCATTTCTCAGATACCAGCAGGCGCTTCGAGAAAGTGTCGTCCTTTATTGCTTTTGCGGTGAACGGTGGCTCCACTCAGGCTAAAGCCACGCATAGGAGAGATGGTAGAAAACCACTTTTGAGTGAGGGGAGAGATGAAGATGAAGCTAGAGGACCCATTTGCCCTGGCTGTGGAGTCTTCATGCAAGATAAGGACCCTAACCTTCTTGGGTATTACCAACCAAAAAAGGTGAAAGTGGAAGAAGAGTTTTCTCAAGAGGATGATGATAATGATGATGTAGAAGAAGAAGAAGATGATGATGATGTGGGGGTTTTCAATGGAAATGAAAGTAAGCTTGGAGAAGAGAGTGAGGGGTTAACAGATGAGTTAGATTGGGATTCTGAGGATTGGGAAGATGAGTTACTGGGTGATGAAGATGATGAGAAGTTGAAATTGGATGGGTTTTCACCTGCAGGAGTTGGGTATGGTAACATTACCGAGGAGTATTTGGAGAGGGTGAAGAAGAAGAAGGTGTCCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTGATAAGGAGAAAGAGGAGGTGACCGTGTGTGCTCGGTGCCATTCCTTGAGAAACTATGGCCATGTGAAGAACCAGACGGCAGAGAATTTGATACCGGATTTCGATTTCAATAGGCTGATTTCGACACAGCTGATGAACCCTTCCGGGAGTGGCAGTGCTACTGTTGTTGTTATGGTTGTGGATTGTGTTGATTTTGATGGTTCGTTCCCTAGAACTGCAGTGAAGTCATTATTTCGGGCATTGGAGAGAATTCAGGATAACTCGAAGCGGGCCAAGAAGCTGCCAAAGCTTGTTCTTGTGGCAACAAAGGTTGATCTCCTTCCGTCAGAGGTTTCTCCTGCGAGGCTGGATAGATGGGTTAGAAACCGTGCACGATCTGGAGGGGCACCTAAGTTAAATGGGGTTTATATGGTGAGTTCAAAGAAGGATTTAGGTGTAAAGAATTTGTTGTCGTTTGTGAAGGGTTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGGGCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCGCTTGCTAAGAAACAAGGAGCTAAAGTTACGAAGCTCACAGAAGCTCCAGTTCCTGGGACAACACTGGGGATCTTGAGAATTGCAGGAGTTTTTCCTGCTAAGACTAAGATGTTTGACACTCCAGGGCTCTTGCATCCATATTTAATGTCAATGAGATTGAACCGGGATGAACAAAAGATGGTTGAGATCCGGAAGGAACTTCGGCCTCGGACATACAGAATTAAGGCAAGGCAGGCTATACACATTGGTGGGTTGACAAGACTTGACCTTGTTGAAGCCTCTGTTGAAACAATATATGTCACTGTTTGGGCATCATCAAATGTTTCTCTTCACATGGGGAAAATAGAAAATGCTGATGAGGTTTGGAGGAATCATGTTGGTATCAGACTGCAGCCTCCCATTGGTAGCGACAGCGCTGTGGAGTTAGGAACATGGCAAGAAAGGGAAGTCAAAGTGTCAGGAACCAGTTGGGATGTGAACAGCATTGACATAGCAATAGCAGGATTAGGTTGGTTCTCCTTGTGTCTCAAAGGTGAAGCCACAACAAAACTGTGGTCATTTGATGGAGTTGAAGTAACATTGAGAGAGCCTCTGGTGCTTGACCGGGCACCATCCCTCGAGAAGCCAGGGTTTTGGTTACCAAAAGCCATCTCTGATGCTATTGGCAACCAAACCAAACTTGAAGCAGCCCAAAGAAGGAAACAACAACAACAACTTGAAGATGAGGGTAGTAGTAACGAATACGTGGGGGCAGGGACAGAGTTGTCTGCATGA 1959 0.4553 MAMLLSTIVVPSTKLIIFNNNNNTQERAIPNSLHFSDTSRRFEKVSSFIAFAVNGGSTQAKATHRRDGRKPLLSEGRDEDEARGPICPGCGVFMQDKDPNLLGYYQPKKVKVEEEFSQEDDDNDDVEEEEDDDDVGVFNGNESKLGEESEGLTDELDWDSEDWEDELLGDEDDEKLKLDGFSPAGVGYGNITEEYLERVKKKKVSKAEKKRMAKEADKEKEEVTVCARCHSLRNYGHVKNQTAENLIPDFDFNRLISTQLMNPSGSGSATVVVMVVDCVDFDGSFPRTAVKSLFRALERIQDNSKRAKKLPKLVLVATKVDLLPSEVSPARLDRWVRNRARSGGAPKLNGVYMVSSKKDLGVKNLLSFVKGLAGPRGNVWVIGAQNAGKSTLINALAKKQGAKVTKLTEAPVPGTTLGILRIAGVFPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTYRIKARQAIHIGGLTRLDLVEASVETIYVTVWASSNVSLHMGKIENADEVWRNHVGIRLQPPIGSDSAVELGTWQEREVKVSGTSWDVNSIDIAIAGLGWFSLCLKGEATTKLWSFDGVEVTLREPLVLDRAPSLEKPGFWLPKAISDAIGNQTKLEAAQRRKQQQQLEDEGSSNEYVGAGTELSA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0485 652 MobiDBLite consensus disorder prediction 117 136 - -
Aed4g0485 652 Coils Coil 202 222 - -
Aed4g0485 652 MobiDBLite consensus disorder prediction 622 652 - -
Aed4g0485 652 MobiDBLite consensus disorder prediction 62 84 - -
Aed4g0485 652 MobiDBLite consensus disorder prediction 636 652 - -
Aed4g0485 652 MobiDBLite consensus disorder prediction 60 84 - -
Aed4g0485 652 MobiDBLite consensus disorder prediction 113 157 - -
Aed4g0485 652 CDD YqeH 226 438 - -
Aed4g0485 652 Gene3D - 265 441 IPR027417 -
Aed4g0485 652 Pfam 50S ribosome-binding GTPase 379 453 IPR006073 GO:0005525
Aed4g0485 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 488 IPR027417 -
Aed4g0485 652 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 1 637 - -
Aed4g0485 652 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 1 637 - -
Aed4g0485 652 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0485 Aed-Chr4 3729888 3735767 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0485 - - gmx:100805561 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0485 4 3729888 3735767 Aed4g0485 4 3729888 3735767 ECH