Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0480 ATGTATCCAATTGGAAATCCTAGTAGTTGGAATTCGTTCCATTTCAAGTTTCCAACAATTTTGTTCCATCTGCGCATGCATGCAGGTGCACAATCTGGTGTATGCTATGGAAGAGTTGGCAACAATTTACCATCTCCACAAGAAGTAGTGGCCCTTTACAAACAGTATGACTTTCGAAGGATGAGAATCTATGATCCAAACCAACAAGTCCTCCAAGCTCTCAGAGGCTCCAACACTGAGTTGCTGCTAGATGTCCCAAATAACAACCTTCAAAATCTAGCATCTAGCCAAGACAATGCAAACAAATGGGTGCAAGAGAACATCGGAAACCATGCCAATGTGAAATTCAGGTACATTTCAGTTGGAAATGAAATCAAGCCTTCGGACTCATTCTCACAATTTCTACTGCCTGCACTGCATAACATCCAAAGAGCTGTTAACAATGCTGGCCTAGGAAACAAAATCAAAGTTTCCACTGCAATTGAGACTGGTGCATTGGCAGAATCATACCCTCCATCAAGAGGCTCCTTTCGGTCTGATTATAGAACTGCATATCTTGATGGTGTCATCAGACATCTAGTGAGCAATAATGCCCCATTGTTGGTTAATGTGTACCCTTACTTCGCTTACATTGGAAACCCTAGGGACATTAGTCTTGACTATGCACTTTTTAGGTCTACTTCGGTGGTGGTGCAGGATGGTTCACTTGGTTACCGTAACCTTTTTGATGCTATGGTGGATGCTGTTTATGCTGCTTTGGAGAAAGCTGGAGGAGGGTCATTGAACATCGTTGTTTCTGAGAGTGGATGGCCTTCTTCTGGTGGAACAGCAACTACACTTGATAATGCAAGAACTTACAATACAAACCTTGTTCGGAGTGTGAAGCAAGGGACTCCAAAAAGGCCTGGTAGAGTACTTGAAACTTATGTGTTTGCCATGTTTGATGAAAATCAGAAGCAGCCCCAGTATGAGAAGTTCTGGGGGCTCTTCCTTCCAAATAAACAGCCCAAATACTCAATTAATTTGAATTAG 1032 0.4244 MYPIGNPSSWNSFHFKFPTILFHLRMHAGAQSGVCYGRVGNNLPSPQEVVALYKQYDFRRMRIYDPNQQVLQALRGSNTELLLDVPNNNLQNLASSQDNANKWVQENIGNHANVKFRYISVGNEIKPSDSFSQFLLPALHNIQRAVNNAGLGNKIKVSTAIETGALAESYPPSRGSFRSDYRTAYLDGVIRHLVSNNAPLLVNVYPYFAYIGNPRDISLDYALFRSTSVVVQDGSLGYRNLFDAMVDAVYAALEKAGGGSLNIVVSESGWPSSGGTATTLDNARTYNTNLVRSVKQGTPKRPGRVLETYVFAMFDENQKQPQYEKFWGLFLPNKQPKYSINLN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0480 343 SUPERFAMILY (Trans)glycosidases 33 341 IPR017853 -
Aed4g0480 343 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 26 340 - -
Aed4g0480 343 Pfam Glycosyl hydrolases family 17 33 341 IPR000490 GO:0004553|GO:0005975
Aed4g0480 343 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Aed4g0480 343 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 26 340 IPR044965 GO:0004553|GO:0005975
Aed4g0480 343 Gene3D Glycosidases 32 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0480 Aed-Chr4 3681464 3682495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0480 28 343 Glycoside Hydrolase AT3G57240 62.776 9.10e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0480 - - gmx:100776357 571.237