Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed4g0476 | ATGACTATGGTAGTAAAGAAAATAATAATTTGGGAGATGAAATTTTGGTTTTATTCCAAAACAAAAGTAAAAACACCAAAGGAAGGACACCCAACAAGCCACCACAAGGAAATCAAGTTGCCTATAAAAGGAGTCACTCCTTCAGTCAGTCCATGCTCTTCCAAACCTTCCCTTCTTTTCTTTTCCAAACCAATATTTTCAGAAAACACAAACATGGTGTCATCAAAACCTGTTGGTGCCTTCTTCTATGAGCAAAAGAGCTTTCCACCATCAATCAAAATCTTCATACTACTCCTAATTAACTCTATACTTCACAAAGCCAACTCAGGCTGCAACAACTCTGCTTCCAACTCCTTAGTTCCATTTCCACCTCATGAAATCCTCTCATCACTGCAAACACTACCTCTAGATGGCCACTTCAGCCTAAGAAACAATGAGAATGCTGCCAATGACTTTGGCAACATACACCATTTCCCTCCCTTGGCAGTGCTCCATCCAAAAACAGTTTCTGACATATCACTCACCATAAAGCATGTTTATGAAATGGGGTTTGCATCACAGTTAAAAATTGCTGCTAGAGGCCATGGCCATTCACTCCAAGGCCAGGCTCAGGCAAATGGAGGACTAGTCATCAACATGGAGTCTTTGAAGGGTCTTGAAATGAAAATTTACAATGGTGAATTGCCTTATGTTGATGTCTCAGGAGGTGAGTTGTGGATAAACATTCTGCATGAAACTCTTCAACATGGGTTGGCACCAAAGTCTTGGACTGATTACCTTCACCTCACTGTTGGTGGCACTCTTTCAAATGCTGGAAAAGGAGAGGTGGTTACTTGCTCAAGGAACCGAAATGCTGATCTTTTTTATGGTGTTCTTGGAGGGCTTGGCCAATTTGGCATCATTACAAGGGCTAGAATTTCTCTTGAACCAGCACCTAAGATGGTGAAATGGATTAGGGTGCTCTACTCAGAATTCTCTACATTTACTAGGGATCAAGAGTATTTGATATCACTTGAAAACACATTTGATTATATTGAAGGAGTGTTGTTGATGACCTATTGTCAAAGCTGA | 1071 | 0.4062 | MTMVVKKIIIWEMKFWFYSKTKVKTPKEGHPTSHHKEIKLPIKGVTPSVSPCSSKPSLLFFSKPIFSENTNMVSSKPVGAFFYEQKSFPPSIKIFILLLINSILHKANSGCNNSASNSLVPFPPHEILSSLQTLPLDGHFSLRNNENAANDFGNIHHFPPLAVLHPKTVSDISLTIKHVYEMGFASQLKIAARGHGHSLQGQAQANGGLVINMESLKGLEMKIYNGELPYVDVSGGELWINILHETLQHGLAPKSWTDYLHLTVGGTLSNAGKGEVVTCSRNRNADLFYGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSEFSTFTRDQEYLISLENTFDYIEGVLLMTYCQS | 356 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed4g0476 | 356 | PANTHER | GULONOLACTONE OXIDASE | 272 | 351 | - | - | |
| Aed4g0476 | 356 | SUPERFAMILY | FAD-binding/transporter-associated domain-like | 146 | 310 | IPR036318 | GO:0050660 | |
| Aed4g0476 | 356 | Gene3D | - | 224 | 272 | IPR016169 | - | |
| Aed4g0476 | 356 | Gene3D | - | 273 | 312 | IPR016169 | - | |
| Aed4g0476 | 356 | Gene3D | - | 314 | 355 | IPR016170 | - | |
| Aed4g0476 | 356 | ProSiteProfiles | PCMH-type FAD-binding domain profile. | 156 | 355 | IPR016166 | GO:0071949 | |
| Aed4g0476 | 356 | Pfam | Cytokinin dehydrogenase 1, FAD and cytokinin binding | 312 | 352 | IPR015345 | GO:0009690|GO:0019139|GO:0050660 | |
| Aed4g0476 | 356 | Gene3D | - | 116 | 223 | IPR016167 | - | |
| Aed4g0476 | 356 | PANTHER | GULONOLACTONE OXIDASE | 86 | 272 | - | - | |
| Aed4g0476 | 356 | SUPERFAMILY | FAD-linked oxidases, C-terminal domain | 312 | 349 | IPR016164 | GO:0003824|GO:0050660 | |
| Aed4g0476 | 356 | PANTHER | CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN | 86 | 272 | - | - | |
| Aed4g0476 | 356 | PANTHER | CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN | 272 | 351 | - | - | |
| Aed4g0476 | 356 | ProSitePatterns | Oxygen oxidoreductases covalent FAD-binding site. | 160 | 195 | IPR006093 | GO:0016491 | |
| Aed4g0476 | 356 | Pfam | FAD binding domain | 160 | 274 | IPR006094 | GO:0050660 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed4g0476 | Aed-Chr4 | 3634985 | 3639923 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed4g0476 | K00279 | - | gmx:100777568 | 479.944 |