Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0474 ATGTCGTCGTCGTCCGCGGCGGTGCATCTCCAATCTCCGATCAGACCCTCCTCCGACGCGCCGCCGCATTCTCCGTTCCTCCATTTCAATGCCGACTGCTTAAACCCCTCCGCCGCCGCCGCCGCTGCCTCCGCCGCGCGCACGAGGTCGAGGCCGAGGCTCGCCAAGCTGAGGAAGCAGTCCGCGTCGCAGCAGGGCAGGTCCCGGAACAGAACCTCCGCCACCGGCGACGACGGCTCCGGCGCCGGCTTCAATCCGTTTCGCTCCGATCAGGTAACCGGTAATGTTAATATTAGTGGAGTGGAGAGCGGTTCCGATGGCGGTTCTTCGAACTGTCATCGTGACGATGCTTTTGTGTTTGGGGCAGGGAAGGGCGATTCTGATTTTGCTAGGGATTTGAAGGAATCGAGTGAGGGAGATATTGGAAAGAGTGGCGGTGTCGAATTTGTGTTTGGTGCTAAACGGAGTGACGAAGATGAATTGAAAATGAAAAATGAAAATGTTGCAGAGACGGTTTCTGGTGAGGAGATGAAGGCGGTGTTGAATTCGGAGGGGGAGCAGGGGAAATTGAATGGTAGGGTGTTTGTTTTTGGTGATTGTAGAAACAATTTGAATTCCGACTCAAATACAGAAAAGGGGAAGTCTGGTGTTCGTGTGGGGGATTTGGGGTTTGATAATGGTGGGGTATTCTGGGAATGCAAGACTGAATTTGAGTGTGGAAAGCGTGATTGTAGTGTTAATAATGTGGAGAAGCCGGAGCCTGTTAGTAGTGTGTGGAATTCGGATCTTGGAATGGGTGCTTTTGGTGTTAAGGTGGTCGGAGTGAATGGTAATAGTGATACTGGTACTGATCAGCGTGATCATTTGGGTGATGGTGGTAAGTGTGAGAGTCGATATGACAGTCTAAATGGTATTGCTGCTACTTACAGTGATGTTCCAGTGCATAATTTATCAGATGAGATGGAGAAACTGAACATCAAATGTTCTGATGGTGCTGATAATGCTAGAGATTCGACGAATTCTTGTGCGAATGGTTGTGCTGGTTTTGTGTTTGGAAGAGCTGACAAGGGTTTTGACTATTCTAGTGTCAGTTCAAGAACTGGTGCTGGTGGTCAGCAGTCTTGTGCTCGTGCTGCTTCTGAGAATATCGGTGGGCAGTTTGCCAAAGCGGCTGGATCAGATGGTGTTCAAAATGAAACTGCTTGTGGTGTTGCCTGTGGTTCTGCAGGAATACATTGCTCTAAACCATGCACTAGTCAGGAAGGCGTCAGAGATTTCCAGTGTGGAAAAATTCCAGAATGTAATGTGTCTGAAGATTCAAAAGTGAATGGAACAGCTGCATCGTTTTCCTTTTCATCATTTGGTTTTGATTCCCATCCAAATTATCATGCTTCCATGGGCCATTCCTCAAGTGTGGATAATGATAAGGGCAAAAATTGTTTTGCAAGTACTCCAGAGGCTTCCAAAGAGTCTTTTGCGGACTTTAAACCCCCGACATGGGATCCTTCTTGTTTCAAAGAAAATTTATTTCCCAAGTTAAATAAAAAAGTTGAATCCACACCAAAGGGCCGATCTTGTAAGGAAAAAGGATCAAAATGTACGAGGCGAAAATTGAAGCTGCATTCCGTAAATAAGAAACAGTCAGGGCTAGATCATTTGTCGAAGGAAAATGGTTCACAGAAATCCCCTGATTCTTCTGGTATCCACTCACCCATGGATTTTTCTCCCTATCAGGAAACAACAGCAAGTGATCATGTAAAAGCTTCTGAAAAATTAAATGATCTGCATTCAACAATTCCTACTGATCGAAGTGGTAGTGTAGCAGGTGCTTCGGCAGATGCTGGGTTTGACTTCACCTCAAAGCAAAAGCATGATGTATTTCGTTTTGTTCCTGGTGTGAATGATTCAAAAGGGAAAGATTTTGCATTTTCTACTTCATCAACTCTGGAGGGTACTCCATCAAAGCGTCAACAGAAAAAGAAATTTAGGAGAAAAATGGGATGCAACCCTTTTGTTATCTCTCCTCGTGTGAATGGAAACTTTGTATCTTCTGTACAATTTTTTCCACATAACACTGCCAACATGTCATCACATTCTGATATACAATTCAAGGAAGGGGATGTTGCATTATCAGATGCAATTCCAGCAGCCTGTGAAACGTGGAGACTCAGGGGGAACCAGGCTCATAAAGATGGGGATCTTTCTAAAGCTGAGGACTTCTACTCACAAGGAATAAATTCTGTCCCTTCAAGTGAAAGATCAGGATGCTGGGCTAAGCCTCTTTTACTATGCTATAGTAACCGTGCAGCAACACGGATGAGTCTTGGAAGGATCAGAGAAGCTCTAGAGGATTGCATGATGGCTACAGATCTGGATCCCACCTTTATGAAAATACAGATGAGAACTGCTAACTGTCACCTTTTGCTAGGGGAAGTAGAAATTGCTCAGCAGTGTTTCATTAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGTAGGGTTATGGTTGAAGCAGCTGAAGGTTTACAGAAGGCTCAGGAAGTGGTCAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACTGCTTTAGAACTAGTTTCCAAGGCATTGTCAATAAGTTTATACTCAGAAAAATTGCTTCAAATGAAGGCAGAGGCTCTATGTTTGCTACAAAAGTATGATGCAGCAATTCAGCTTTGTGAACAGAGTCAGCATCTTGCAGAAAAGAATTTTGTCTTGGCAAACAATGCAGAGAATTCTGACAGTTCCTTATGTGATAGCTACTCAAGTGAAAAATTGTGGAGGTGGTCACTGAAATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAAGCATCACTTAATGTTCTCGAGAAATTACAGCAAGTTGTTTCTGTCACTGACAAGTGTGTGATTGATAACATTGAAAACTTGCTGACATTAGCTTCTACAATACGAGAACTTCTGGACCACAAGAAGGCAGGAAACGAAAACTTTAAATTGGGAAAGCATACGGAAGCTGTAGAGAATTACACTGCTGCTTTATCATGCAATACTAAATCACGTCCTTTTATGGCAATTTGTTTCTGCAACCGTGCTGCAGCTCATCAAGCTTTGGGCCAAATTGCTGATGCCATTGCAGACTGTAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTACATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAAGAGACTTATAGCTGTTCTTGAGACTCAATCCAATGAAAGGGACAAACAATTTGACTCAACCAGTGGATCTAATGGTGTGAAAGAATCAAGGCAAGCTCATCAACGTCTGCTTTCAGTGGAAGATCAAGCCAAAAAGGGAACACCGTTGGATGTTTACCTCATTTTAGGAATCAAATCAGCTGACACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTTAGACATCATCCAGACAAGGCTGGTCAGTTGTTGGCTAGAAGTGAAGTTGGAGATGAAGGCCAACTTTGGAAGGAAATTTCACAGGAGGTGTACAAGGATGCCGATAAGCTTTTCAAAATGATTGGAGAAGCGTATGCTGTGCTTTCAGACCCAACCAAGCGCTCGGATTATGATTTGGAAGAGGAGATAAGGAAAGCTTCTAAGTTATGTAACAGAGGTGGCACAAGCAGGAGATCTTCAGATGCTTATGGGTGTGGAAGACCGTTTGATGGTTACAAATCTCCATCTGACAGAACTTCTAACAGACGAAATGGACGGGATCAATGGAAGACCTATGGACATTCATATTCTCGATGGTAA 3861 0.4393 MSSSSAAVHLQSPIRPSSDAPPHSPFLHFNADCLNPSAAAAAASAARTRSRPRLAKLRKQSASQQGRSRNRTSATGDDGSGAGFNPFRSDQVTGNVNISGVESGSDGGSSNCHRDDAFVFGAGKGDSDFARDLKESSEGDIGKSGGVEFVFGAKRSDEDELKMKNENVAETVSGEEMKAVLNSEGEQGKLNGRVFVFGDCRNNLNSDSNTEKGKSGVRVGDLGFDNGGVFWECKTEFECGKRDCSVNNVEKPEPVSSVWNSDLGMGAFGVKVVGVNGNSDTGTDQRDHLGDGGKCESRYDSLNGIAATYSDVPVHNLSDEMEKLNIKCSDGADNARDSTNSCANGCAGFVFGRADKGFDYSSVSSRTGAGGQQSCARAASENIGGQFAKAAGSDGVQNETACGVACGSAGIHCSKPCTSQEGVRDFQCGKIPECNVSEDSKVNGTAASFSFSSFGFDSHPNYHASMGHSSSVDNDKGKNCFASTPEASKESFADFKPPTWDPSCFKENLFPKLNKKVESTPKGRSCKEKGSKCTRRKLKLHSVNKKQSGLDHLSKENGSQKSPDSSGIHSPMDFSPYQETTASDHVKASEKLNDLHSTIPTDRSGSVAGASADAGFDFTSKQKHDVFRFVPGVNDSKGKDFAFSTSSTLEGTPSKRQQKKKFRRKMGCNPFVISPRVNGNFVSSVQFFPHNTANMSSHSDIQFKEGDVALSDAIPAACETWRLRGNQAHKDGDLSKAEDFYSQGINSVPSSERSGCWAKPLLLCYSNRAATRMSLGRIREALEDCMMATDLDPTFMKIQMRTANCHLLLGEVEIAQQCFIKCMESGSVVCLDRRVMVEAAEGLQKAQEVVKCINNAAELLKERTSDAAVTALELVSKALSISLYSEKLLQMKAEALCLLQKYDAAIQLCEQSQHLAEKNFVLANNAENSDSSLCDSYSSEKLWRWSLKSKCYFRLGRLEASLNVLEKLQQVVSVTDKCVIDNIENLLTLASTIRELLDHKKAGNENFKLGKHTEAVENYTAALSCNTKSRPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLHEMVRDYEQAACDLKRLIAVLETQSNERDKQFDSTSGSNGVKESRQAHQRLLSVEDQAKKGTPLDVYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDEGQLWKEISQEVYKDADKLFKMIGEAYAVLSDPTKRSDYDLEEEIRKASKLCNRGGTSRRSSDAYGCGRPFDGYKSPSDRTSNRRNGRDQWKTYGHSYSRW 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0474 1286 CDD DnaJ 1142 1217 IPR001623 -
Aed4g0474 1286 Gene3D Tetratricopeptide repeat domain 995 1116 IPR011990 GO:0005515
Aed4g0474 1286 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 27 1286 - -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 1 112 - -
Aed4g0474 1286 ProSiteProfiles dnaJ domain profile. 1142 1228 IPR001623 -
Aed4g0474 1286 SUPERFAMILY TPR-like 715 969 IPR011990 GO:0005515
Aed4g0474 1286 Coils Coil 843 863 - -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 57 79 - -
Aed4g0474 1286 SUPERFAMILY TPR-like 999 1096 IPR011990 GO:0005515
Aed4g0474 1286 MobiDBLite consensus disorder prediction 1105 1124 - -
Aed4g0474 1286 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 27 1286 - -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 1107 1123 - -
Aed4g0474 1286 SMART tpr_5 718 751 IPR019734 GO:0005515
Aed4g0474 1286 SMART tpr_5 886 919 IPR019734 GO:0005515
Aed4g0474 1286 SMART tpr_5 762 795 IPR019734 GO:0005515
Aed4g0474 1286 SMART tpr_5 996 1029 IPR019734 GO:0005515
Aed4g0474 1286 SMART tpr_5 1034 1067 IPR019734 GO:0005515
Aed4g0474 1286 SMART tpr_5 1068 1101 IPR019734 GO:0005515
Aed4g0474 1286 ProSitePatterns Nt-dnaJ domain signature. 1205 1224 IPR018253 -
Aed4g0474 1286 SUPERFAMILY Chaperone J-domain 1122 1224 IPR036869 -
Aed4g0474 1286 PRINTS DnaJ domain signature 1162 1177 IPR001623 -
Aed4g0474 1286 PRINTS DnaJ domain signature 1144 1162 IPR001623 -
Aed4g0474 1286 PRINTS DnaJ domain signature 1200 1220 IPR001623 -
Aed4g0474 1286 SMART dnaj_3 1141 1220 IPR001623 -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 529 543 - -
Aed4g0474 1286 Gene3D Tetratricopeptide repeat domain 718 932 IPR011990 GO:0005515
Aed4g0474 1286 Pfam DnaJ domain 1142 1225 IPR001623 -
Aed4g0474 1286 Gene3D DnaJ domain 1128 1243 IPR036869 -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 86 110 - -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 1237 1286 - -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 516 584 - -
Aed4g0474 1286 MobiDBLite consensus disorder prediction 553 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0474 Aed-Chr4 3616793 3625800 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0474 K09527 - gmx:100809278 2143.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0474 4 3616793 3625800 Aed4g0474 4 3616793 3625800 ECH