Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0466 ATGGCTTCTAGCTTTGAAAGCTCACCACCCATGGCTTCCAACAACTACAGAAGGCACGAGAATGACGTGTTCCATCATCCACTACAACATCAAGTGGTGGTGGTGGTGGTGCCTTTCCCTGCACAGGGTCACCTGAACCAGCTCCTCCACCTCTCTCGCCTCATCTTGTCACACAACATACCCGTCCACTTCGTAGGTTCCCGAACCCACAATCGTCAAGTCGTAGTTCGTGCCCAGGGGTGGGACCCGAACTCCATTTACAACATTCACATCCACGACTTCAACGTCCCCGATTTCGTCTCCCCTGCCCCCAACCCATCCACCGATACGAGGTTCCCCTCCCATCTCCTGCCCTCCTTCCAGGTCGCCTCGTCGAGCCTCCGCGAGCCCGTCTACGCCCTCCTGCAGTCGCTCTCCAAGGTCGCCAGGAGGGTTGTTGTCATCAACGATTCCCTCATGGCGTCAGTTGTTCAAGACAATATTCATATTGCCAATTGCGAGAGCTACACTTTCCACAGCGTCTCCGCCTTCACCATGTTTCTCTACTTCTCCGACGCAATGGGAAGGCCCCCGTTCGAGAAAATGTCCCACATCGGCAACATCGTCCCGGAGGTTCCCTCCCTCCAAGGATGCTTCACGGAGAAGTTCATAGATTTCATGGCCTCGCAATACGAGTTTCATAAATTCAGCAAGGGGACTATATACAACACGACGAGAGCGATCGAGAGGCCTTACATGGAGTTAATAGAGAATATTGGGTTTGAAGAGAGAATGCGAGGAACCGGGTTGGTTGTTAGAGACTGGGCGCCGCAACTGGAGATTCTGAGCCACGGTTCGACCGGGGGGTTCATGAGTCACTGTGGGTGGAACTCTTGCATGGAGAGCATAACGATGGGGGTGCCAATAGCAGCGTGGCCTATGCACTCTGACCAGCCCAGGAACAGGGTTTTGGTGACGGAGGTGCTGAAAGTTGGGGTGGTTGTGAAGGAGTGGGAGCGGAGGGATGAGTTGGTCACAGCGTCGGAGGTTGAGAATGCCGTGAGGAGATTGATGGCAAGTGAAGAAGGTGATGAGATGAGACAAAGGGCAATGAACCTCAGAAACGCTATTCGCAAATCCAGGGATGAAGGAGGCGTTTCTCGCGTGGAATTCGATGACTTCATTGCCCACGTCACTAGATAG 1182 0.5372 MASSFESSPPMASNNYRRHENDVFHHPLQHQVVVVVVPFPAQGHLNQLLHLSRLILSHNIPVHFVGSRTHNRQVVVRAQGWDPNSIYNIHIHDFNVPDFVSPAPNPSTDTRFPSHLLPSFQVASSSLREPVYALLQSLSKVARRVVVINDSLMASVVQDNIHIANCESYTFHSVSAFTMFLYFSDAMGRPPFEKMSHIGNIVPEVPSLQGCFTEKFIDFMASQYEFHKFSKGTIYNTTRAIERPYMELIENIGFEERMRGTGLVVRDWAPQLEILSHGSTGGFMSHCGWNSCMESITMGVPIAAWPMHSDQPRNRVLVTEVLKVGVVVKEWERRDELVTASEVENAVRRLMASEEGDEMRQRAMNLRNAIRKSRDEGGVSRVEFDDFIAHVTR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0466 393 ProSitePatterns UDP-glycosyltransferases signature. 268 311 IPR035595 -
Aed4g0466 393 Gene3D Glycogen Phosphorylase B; 255 375 - -
Aed4g0466 393 PANTHER GLYCOSYLTRANSFERASE 253 393 - -
Aed4g0466 393 PANTHER GLYCOSYLTRANSFERASE 253 393 - -
Aed4g0466 393 Gene3D Glycogen Phosphorylase B; 25 254 - -
Aed4g0466 393 PANTHER GLYCOSYLTRANSFERASE 26 251 - -
Aed4g0466 393 Coils Coil 356 376 - -
Aed4g0466 393 CDD GT1_Gtf-like 38 381 IPR002213 GO:0008194
Aed4g0466 393 PANTHER GLYCOSYLTRANSFERASE 26 251 - -
Aed4g0466 393 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 33 393 - -
Aed4g0466 393 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 354 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0466 Aed-Chr4 3516957 3518429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0466 253 391 Glycosyltransferase AT2G15490 41.844 1.76e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0466 K13495 - gmx:100799527 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0466 4 3516957 3518429 Aed4g0466 4 3516957 3518429 ECH
Aed4g0466 4 3516957 3518429 Aed8g1336 8 17158808 17160211 PCT