Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0461 ATGTCAGGAGGGTTGAAGGAATTGGTGAAGAAAGGGTTAGGTTTAGGCGACATGGCGTTCAACGCCGGCGGCGGAGCCATCAACTGGTTCCCCGGTCACATGGCCGCCGCCACACGCGCCATCCGCAACCGCCTCAAACTCGCCGACCTCGTCATCGAAGTCCGCGACGCCCGCATTCCCCTCTCCTCCGCCAACGCCGATCTCCAGCCACACCTCTCCGCCAAACGACGCGTCGTCGCACTCAATAAAAAAGACCTCGCCAACCCTAACATCATGCATAAATGGACGCATTATTTTGAGACGTGCAAGCAGGACTGCGTTGCGATAAACGCGCACAGCAAGAGTTCCGTGAATAAGCTTCTGGAGGTGGTGGAGTTTAAGCTTAAGGAAGTGATTTGCAAGGAACCGACGCTGCTTGTGATGGTGGTTGGTGTTCCAAATGTTGGCAAGTCTGCTTTGATTAACTCCATTCATCAAATTGCAAAGTCTCGGTTTCCCCCGCAGAAGATGAAGCGGGCCACCGTGGGTCCGCTACCTGGTGTGACTCAAGACATTGCTGGATTCAAGATAGCACATAAACCAAGCATATATGTCCTAGATACCCCAGGGGTTCTGGTTCCAAGTATCTCAGACATAGAGACAGGGTTAAAACTGGCTCTGGCAGGGTCTGTCAAAGATTCAGCAGTGGGTGAGGAGCGTATTGCTCAATACTTATTGGCAGTTTTAGATACCCGGGGAACACCACTTCACTGGAAGTACCTAAATAACAGGAGAATAGATGGGATTGAATATGAAGCTGGGGAAAATCATGAATATAGTCTGAAGAATCTCAAGCCAAATAGAAGAAGTCTGCCAAATAGATCTGATTTGGTTTATGTTGAGGATCTTGTAATCGGAGTTCAGCGTGCACTGTATTCAACTCTAGCAGAATTCAATGGGAATGTAGAAGATGAGAGTGACCTGGAGACCCTTATTGACCTGCAATTTGGTGCACTGCAGAAGGCATTGAAGATACCTCACAAAGCTTCAGAAGCTCGGTTAATGGTATCCAAGAAGTTCCTTACTTTATTCAGGACTGGCAAGCTTGGACCTTTCATTCTTGATGATGTCCCGAATGTTGAGTTTGTATCATAA 1134 0.4832 MSGGLKELVKKGLGLGDMAFNAGGGAINWFPGHMAAATRAIRNRLKLADLVIEVRDARIPLSSANADLQPHLSAKRRVVALNKKDLANPNIMHKWTHYFETCKQDCVAINAHSKSSVNKLLEVVEFKLKEVICKEPTLLVMVVGVPNVGKSALINSIHQIAKSRFPPQKMKRATVGPLPGVTQDIAGFKIAHKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSAVGEERIAQYLLAVLDTRGTPLHWKYLNNRRIDGIEYEAGENHEYSLKNLKPNRRSLPNRSDLVYVEDLVIGVQRALYSTLAEFNGNVEDESDLETLIDLQFGALQKALKIPHKASEARLMVSKKFLTLFRTGKLGPFILDDVPNVEFVS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0461 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 221 IPR027417 -
Aed4g0461 377 Pfam 50S ribosome-binding GTPase 140 249 IPR006073 GO:0005525
Aed4g0461 377 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 20 373 - -
Aed4g0461 377 CDD YlqF 29 205 - -
Aed4g0461 377 Gene3D - 27 205 IPR027417 -
Aed4g0461 377 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 20 373 - -
Aed4g0461 377 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 38 207 IPR030378 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0461 Aed-Chr4 3474621 3477866 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0461 K19828 - gmx:100801130 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0461 4 3474621 3477866 Aed4g0461 4 3474621 3477866 ECH