LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g0448	ATGGCGTGCAACGGCTCTGGGTGCCAGTCCGGTGGTTGCTACAAAGACGAAGACGCAACATGTAACCAAACAACCAAGTCTGAAGTAACCGATTCAAAAAACCCTAGCAATGTCTGCATCAAGTGCAAGCTCAACGACGCCGTTTCGGGCTACGGTGGAATCGACGACGGTCGTTTCTGCGTCGAGTGCTTCAAAACCAACTTGTTCGGCAAGTTTCGTTTCGCTATCACTTCAAACGCCATGATCACTCCCACCGATAAGGTCCTCGTTGCCTTTTCAGGTGGCCCTTCTTCCAGGGTAGCTTTGCAATTCGTGCATGATATGCAAGAGAGAGCACAAAGGAACTTTGATGCGAGTAGGGATAGGTCGTTGCCGGTGTTTGGTGTGGGAGTTGTGTTTATTGATGAGAGTATCGTGTTGCCGATTCCTTCTAATGAAATGGAGGAAGCTGTTGAAGTGATTACGGAAGTTGTGTCGTGTTTAGCTTCGCCGAGGAAGGAGTTTCATATTGTTCCTATTGAGAAGGTTTACTCCTCGGATTCTGGTGATGGGAAGGAGAGGTTGATCAAGGCAGTGAACGCGGTGAGTGATCCGACGGGAAGGGAGGATGTGTTGCTTTGTCTGCGAATGTTGGTGCTGCAAAAGGTTGCTTCTGAATTTGGGTATAACAGGATCGTTCTGGGGTCATGCATTTCGAGGATTGCTTGCCATGTCATTTCAGCCACTGTGAAGGGTCAAGGATACTCATTACCTGCAGATATACAATATGTTGATGCTAGATGGGAAGTTCCTGTTGTGCTTCCTCTGCGTGATTGTTTTGCCCAAGAGATCAACATGCTTTGCCAACTTGACGGGTTTGGCAGTCTAAAGACTGTTAAGTTGTCTACAGGTCCTTGCTCTAGCATTAATGGCTTGGTATCATCCTTTGTGGCTTTATTGCAGGAAGAAAACCCATCTCGGGAGAGCACGATTGTAAGAACAGCCGGTAAACTTACTCCCTTCCAATTTAACAGGATTCCAGAGATCATTGATGGTAATGTTCCTTTGGCAACTCGAAGACGCCAGAAGAGATATAATCTCAAATCCAATGAATCTGTTTCCTCAGAATCTTTCTGTCCTCTCTGCAGCAGCCCACTCGACAAGAGTGAGATTGTTGATTGGAGTAATATTGATAGCCACAGAAGTAGTGATATTTTTTATAATACCTGCTGTTCTAGTTGTCAGTTTCAGATACTTCCAAGTGATTCCATGTCAATTGAACAATTTTATATGGATTTACCTCAGTCAGTGGTTTGCCGAGCAAAGCAAGCCAACAATGGTAATTTGAGTCTGTTAAGGGAACAAATACAAGATTGCCTGCTTTCGGATGAAGATGAAACATAG	1383	0.4512	MACNGSGCQSGGCYKDEDATCNQTTKSEVTDSKNPSNVCIKCKLNDAVSGYGGIDDGRFCVECFKTNLFGKFRFAITSNAMITPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDASRDRSLPVFGVGVVFIDESIVLPIPSNEMEEAVEVITEVVSCLASPRKEFHIVPIEKVYSSDSGDGKERLIKAVNAVSDPTGREDVLLCLRMLVLQKVASEFGYNRIVLGSCISRIACHVISATVKGQGYSLPADIQYVDARWEVPVVLPLRDCFAQEINMLCQLDGFGSLKTVKLSTGPCSSINGLVSSFVALLQEENPSRESTIVRTAGKLTPFQFNRIPEIIDGNVPLATRRRQKRYNLKSNESVSSESFCPLCSSPLDKSEIVDWSNIDSHRSSDIFYNTCCSSCQFQILPSDSMSIEQFYMDLPQSVVCRAKQANNGNLSLLREQIQDCLLSDEDET	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g0448	460	Pfam	Cytoplasmic tRNA 2-thiolation protein 2	301	391	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Aed4g0448	460	PANTHER	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2	28	455	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Aed4g0448	460	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	63	286	-	-
	Aed4g0448	460	Hamap	Cytoplasmic tRNA 2-thiolation protein 2 [CTU2].	33	415	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Aed4g0448	460	Gene3D	HUPs	38	399	IPR014729	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g0448	K14169		-	gmx:100804325	847.04

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g0448	4	3293501	3296837	Aed4g0448	4	3293501	3296837	ECH