Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0446 ATGGCAGTGGGAAAGGACGACGTTGAGATCGTGAAGGCGCGCATCGACAAGAGAGATTACAGAAGAGTCGTGCTTCGCAACTCGCTCCAAGTGCTTCTCATTAGCGATCCCGATACCGATAAGTGTGCTGCTTCCATGGACGTTGGCGTCGGTTACTTCAGCGACCCTGCTGGCCTCGAAGGCCTTGCTCATTTCCTCGAAAACCAGAAGAATTTATTATCTGATGCATGGAGAATGAACCAGCTTCAGAAACATCTCAGTGATGAAGATCATCCATATCATAAATTTAGCACAGGGAACTGGGACACTTTGGAAGTTAGACCAAAAGCAAAAGGATTAGACACAAGGAACGAGCTTCTCAAATTCTATGAAGAAAACTACTCTGCTAATCTAATGCATCTAGTTATATACACAAATGAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATCAGAAACACAAACAAAAGTTGTTTCCATGCCCGTGATCAGCCATGCAAATCAGAGCATTTGCAGATTCTTGTCAGGACTGTCCCAATAAAGCAAGGTCATAAATTGAGAATTGTGTGGCCAGTAACCCCTGAAATTCATCATTACACTGAAGGGCCAAGCAGGTATCTTGGTCATCTTATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTGAAAAATTTGGCAGTTTGTGAGACCAAGTTTCATTATCAGGACAAAATTCCTCCTAGTGATTATGTTGTTAATATTGCGTCAAATATGCAGTTTTATCCTGTAAAAGACTGGTTGACAGGATCATCCTTGCCTTCTAAATTTAGCCCAAGTGTTATCCAAATGGTACTAGATCAGCTTTCTCCAGACAATGTCAGAATCTTTTGGGAGTCTAAAAAATTTGAAGGGCTTACGGATAAGGTGGAGCCATGGTATGGAACTGCATATTCCCTTGAAAAGATCACTGGCTCTTCAATTCAGGGGTGGGTGCTTTCTGCTCCTGATGAAAATATGCATCTTCCAGCTCCTAACAAATTCATTCCAACTGACTTGTCACTTAAAGTTGTGCAAGAAAAAGTAAGGTTTCCAGTTTTGTTAATCAGATCATCTTATTCAGCCTTATGGTACAAGCCAGATACACTGTTTTCTACACCCAAGGCTTATGTAAAGATTGATTTCAATTGCCCATATTCTGGAAACTCTCCTGAGGCTGAAGTTTTGACGCATATTTTCACACAGTTATTGATGGATTACTTGAATGAATATGCTTATTATGCTCAGGTTGCTGGTTTATATTACAGCATAAATCACACAGATGGTGGTTTCCAGGTGACTCTCCTTGGTTACAATCACAAGTTAAGGATTCTACTTGAAACTATAGTTGAAAAGATTGCAACATTTGAAGTGAAAAATGATAGGTTTTCAGTTATCAAGGAAATGGTAACCAAAGAATACCAGAATTTCAAATACCAACAACCTTATCAGCAGGCTATGTACTATTGCTCTTTGATATTACAAGATCAAACCTGGCCTTGGATAGAACAACTAGATGTACTTCCTGCTCTTCAAGTTGAAGATCTTGCTAAATTTGTACCAGCAATGCTCTCCAGGACCTTTTTAGAGTTTTATATAGCAGGGAACATTGAAAGCCACGAAGCACAGTCAATGGTTAAGCACATAGAAGATGTTCTCTTTAATTGTTCAAAACCACTGTGCAAGCCTTTATTCTCATCTCAACATCTGGCAAATCGGGTTGTTAAACTTGAAAGTGGCATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAGATGAGAATTCTGCTCTTGTGCTCTATACACAGGTTGGTCGAGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCCCTTGTTGCGAAGCAACCGACCTTTCATCAGCTACGATCAGTTGAGCAGCTGGGGTACATTACTGTGCTCATGCAGAGAAATGATTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGTAAAGTCTCCTGGAGACATTGAGCAAAGGGTCGAGGCATTTCTCAAAACGTTTGAGACCAAACTCCTTGAGATGACAACTGATGAATTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATTTGAGGGAAGAATCATCAATTTTCTGGCGAGAGATTAACAATGGTACTTTGAGGTTTGATAGGAAAGATTATGAGGTTGAAGCATTAAGGCAGCTCACTCTTCAAGAGTTGATAGATTTCTTCAATGAATATGTCAAACTTGGTGCACCTCGAAAGAAAACTTTAAGTGTACGAGTACACGGGAAACGCCATTCTTCTGAATACAAAGCAGAAGCCTCAGAACCACACTTGGCTAAAATAGATAATATCTTCACTTTTAGAAGATCACAGTCTCTTTATGGTTCATTCAAAGGACTTTCTGGGCAGATGAAATTATAG 2475 0.3939 MAVGKDDVEIVKARIDKRDYRRVVLRNSLQVLLISDPDTDKCAASMDVGVGYFSDPAGLEGLAHFLENQKNLLSDAWRMNQLQKHLSDEDHPYHKFSTGNWDTLEVRPKAKGLDTRNELLKFYEENYSANLMHLVIYTNESLDKIQNLVEEKFQDIRNTNKSCFHARDQPCKSEHLQILVRTVPIKQGHKLRIVWPVTPEIHHYTEGPSRYLGHLIGHEGEGSLYYILKNLAVCETKFHYQDKIPPSDYVVNIASNMQFYPVKDWLTGSSLPSKFSPSVIQMVLDQLSPDNVRIFWESKKFEGLTDKVEPWYGTAYSLEKITGSSIQGWVLSAPDENMHLPAPNKFIPTDLSLKVVQEKVRFPVLLIRSSYSALWYKPDTLFSTPKAYVKIDFNCPYSGNSPEAEVLTHIFTQLLMDYLNEYAYYAQVAGLYYSINHTDGGFQVTLLGYNHKLRILLETIVEKIATFEVKNDRFSVIKEMVTKEYQNFKYQQPYQQAMYYCSLILQDQTWPWIEQLDVLPALQVEDLAKFVPAMLSRTFLEFYIAGNIESHEAQSMVKHIEDVLFNCSKPLCKPLFSSQHLANRVVKLESGMNYFYPSECLNPEDENSALVLYTQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLMQRNDCGIRGLQFIIQSTVKSPGDIEQRVEAFLKTFETKLLEMTTDEFKSNVNALIDVKLEKHKNLREESSIFWREINNGTLRFDRKDYEVEALRQLTLQELIDFFNEYVKLGAPRKKTLSVRVHGKRHSSEYKAEASEPHLAKIDNIFTFRRSQSLYGSFKGLSGQMKL 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0446 824 Gene3D - 2 68 - -
Aed4g0446 824 Gene3D - 69 161 - -
Aed4g0446 824 Gene3D - 586 819 - -
Aed4g0446 824 PANTHER NARDILYSIN 67 231 - -
Aed4g0446 824 PANTHER NARDILYSIN 6 67 - -
Aed4g0446 824 PANTHER NARDILYSIN 232 824 - -
Aed4g0446 824 SUPERFAMILY LuxS/MPP-like metallohydrolase 6 161 IPR011249 GO:0046872
Aed4g0446 824 Gene3D - 165 233 - -
Aed4g0446 824 Gene3D - 234 342 - -
Aed4g0446 824 SUPERFAMILY LuxS/MPP-like metallohydrolase 344 568 IPR011249 GO:0046872
Aed4g0446 824 Pfam Middle or third domain of peptidase_M16 238 517 IPR032632 -
Aed4g0446 824 SUPERFAMILY LuxS/MPP-like metallohydrolase 585 812 IPR011249 GO:0046872
Aed4g0446 824 Pfam Peptidase M16 inactive domain 115 230 IPR007863 -
Aed4g0446 824 Pfam Peptidase M16 inactive domain 522 709 IPR007863 -
Aed4g0446 824 SUPERFAMILY LuxS/MPP-like metallohydrolase 168 343 IPR011249 GO:0046872
Aed4g0446 824 PANTHER ENZYME, PUTATIVE-RELATED 67 231 - -
Aed4g0446 824 PANTHER ENZYME, PUTATIVE-RELATED 6 67 - -
Aed4g0446 824 PANTHER ENZYME, PUTATIVE-RELATED 232 824 - -
Aed4g0446 824 Gene3D - 359 585 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0446 K01408 - gmx:100804856 1408.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0446 4 3238352 3253621 Aed4g0446 4 3238352 3253621 ECH