Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0440 ATGACGGTGACACCTAAGATCTCAGTTAACGATGGGAAGCTTGTTGTCCATGGCAAGACCATTCTGACTGGAGTGCCGGACAACGTTGTGCTGACACCAGGTTCTGGAAAGGGCCTTGTGACTGGTGCATTCGTTGGTGCCACAGCTTCACACAGCAAAAGTCTCCATGTGTTTCCAATGGGTGTCTTAGAGGGGCTACGGTTCATGTGTTGCTTCCGGTTCAAGCTATGGTGGATGACTCAGAGAATGGGAACTTGTGGGAGGGATGTGCCTCTGGAGACACAGTTCATGCTTATTGAGAGCAAAGAGAGTGAGACTGATGGGGATAATTCTCCAATCATCTACACTGTCTTGCTTCCTCTCCTTGAAGGTCAATTCCGAGCTGTTCTTCAAGGCAATGACAAGAACGAGATAGAGATTTGCCTCGAGAGTGGGGATAATGCAGTTGAGACTGACCAAGGCCTTCACATGGTCTACATGCATGCTGGGACCAACCCCTTTGAAGTCATCAATCAAGCTGTCAAGGCTGTGGAAAAACACATGCAAACTTTTCTTCACCGTGAGAAGAAAAAATTGCCATCTTTCCTTGACTGGTTTGGATGGTGCACATGGGATGCTTTCTATACTGAGGTCACAGCTGAGGGTGTTGAGGATGGCCTAAAAAGGTTTGCTACAAGGCTGACTGGTATTAAAGAGAATACTAAATTTCAAAAGAAACCACAGAACAATGAGCAGATATCAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAACCGGCATGGAACATTATGACACTGCCTTGGCATATCCAGTGCAGTCACCTGGTGTTCTAGGAAATCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCCTCGGCCTAGTCCCCCCAAAGAAGGTTTTCAATTTCTACAACGAGCTCCATGCTTACCTAGCTTCATGTGGAGTCGATGGAGTGAAGGTTGATGTGCAGAACATCATTGAGACTCTTGGTGCTGGACACGGAGGAAGAGTCTCTCTTACGCGCAGCTATCATCATGCCCTCGAGGCTTCCATTGCTCGCAACTTTGACGACAATGGATGCATTGCGTGTATGTGTCACAACACTGATGGACTCTATAGTGCCAAGCAAACTTCTGTTGTGAGAGCTTCTGATGATTTCTACCCTCGTGATCCTGCTTCACACACCATTCATATTTCATCTGTTGCATACAACTCACTTTTCCTTGGGGAATTCATGCAGCCTGATTGGGACATGTTTCATAGTTTACACCCGGCAGCAGATTATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCAATTTATGTTAGTGACAAGCCAGGCAACCACAACTTTGATCTTCTTAAGAAGCTGGTTCTCCCTGATGGTTCAGTTCTCCTTGCTCAGTTACCTGGCAGGCCAACTCGCGACTCTCTCTTTGTTGATCCAGCTAGAGATGGGACTAGCTTGCTCAAAATATGGAACCTGAACAAATGCTCTGGAGTTGTTGGTGTGTTTAACTGCCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAAACTCGCATCCATGATACAACTCCTGTTACACTCACTACCTCTGTCTGTGCTTCTGATGTTGACCTCATCACACAAGTAGCAGATGCTGAATGGCTTGGAGACACTATTGCTTATGCTTACAGATCAGTTCCAGTGACACTAAAAGTTCTGGAGTTTGAGCTTTTCCACTTCTGTCCAATCCAAGAAATAGCACCAGGTATTTCATTTGCAGCAATAGGGCTATTGGATATGTTCAACACTGGAGGAGCAGTGGAGCAGGTTGAGATTCATAGAGCCTCTAACAACAGACCAGAACTGTTTGATGGTGAGGTGTTATCAGCAACTATTGCTCTTAGAGTCAGAGGAAGAGGCAGATTTGGAGTTTACTGCTCCCAGAGACCACTGAAGTGTGTGGTTGGCGGCGCCGAAACCGACTTCAACCATGACTCGGAGACTGGCTTGACAACCTTCTACATCCCAGTTCCTCCAGAGGAGATGCACAGATGGTCCTTAGAGATCCAAGTTTGA 2070 0.4696 MTVTPKISVNDGKLVVHGKTILTGVPDNVVLTPGSGKGLVTGAFVGATASHSKSLHVFPMGVLEGLRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKESETDGDNSPIIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDNAVETDQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTEVTAEGVEDGLKRFATRLTGIKENTKFQKKPQNNEQISAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVPPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFDDNGCIACMCHNTDGLYSAKQTSVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAADYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLPDGSVLLAQLPGRPTRDSLFVDPARDGTSLLKIWNLNKCSGVVGVFNCQGAGWCKIEKKTRIHDTTPVTLTTSVCASDVDLITQVADAEWLGDTIAYAYRSVPVTLKVLEFELFHFCPIQEIAPGISFAAIGLLDMFNTGGAVEQVEIHRASNNRPELFDGEVLSATIALRVRGRGRFGVYCSQRPLKCVVGGAETDFNHDSETGLTTFYIPVPPEEMHRWSLEIQV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0440 689 Pfam Raffinose synthase or seed imbibition protein Sip1 248 672 IPR008811 -
Aed4g0440 689 Pfam Raffinose synthase or seed imbibition protein Sip1 7 224 IPR008811 -
Aed4g0440 689 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 246 689 - -
Aed4g0440 689 PANTHER - 246 689 IPR008811 -
Aed4g0440 689 Gene3D Aldolase class I 197 460 IPR013785 -
Aed4g0440 689 SUPERFAMILY (Trans)glycosidases 195 460 IPR017853 -
Aed4g0440 689 PANTHER - 1 232 IPR008811 -
Aed4g0440 689 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0440 Aed-Chr4 3168439 3174334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0440 1 496 Glycoside Hydrolase AT3G57520 73.609 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0440 K06617 - gmx:100807861 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0440 4 3168439 3174334 Aed4g0440 4 3168439 3174334 ECH