Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0431 ATGGCAACGGGAACGGGGAGTAAGAAGAAAGCACCACCTCTCTCTTTGCAGCAATTCATCTCCATTACCGCTCCTCTTCTTGACTTGGAAAAGGAAGCTGAGATTTCAAGCTCAATCACCACTGGCGCCTCCAGGAATTTGGACACTGCTCAAAAGAGGGGTTCCACAATCCTCAACTTGAAGTGCGTCGATGTCCAGTCAGGGCTTATGGGGAAGTCTCTGATCGAGTTCCAGTCTACAAAAGGAGATGTTCTTCCTGCACACAAGTTTGGTACTCATGATGTTGTTGTTTTAAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGACAAGGTGTTGTTTACAGGTTAAAGGATTCATCAATAACTATTGCCTTTGATGATATACCAGAAGATGGTTTAAACAGTCCCCTAAGGCTGGAAAAAGTAGCAAATGAGGTGACATATCGCAGAATGAAAGACGCATTGGTACAGTTGAGTAAAGGAGTGCACAAGGGTCCTGCCTCTGATCTGATTCCTGTCTTGTTTGGGGAGAGGTCACCAACAGTGTGCAAGAAGGATGTATCATTCACTCCCATTAATATCAATCTTGATCACTCTCAGATTCTTGCTTGTGCTGCCTCGAATATTGCTGTTGACAACATTGTTGAGCGGCTAGTTCCACATAGAGTTAAGCTGGTGAGAGTGGGTCATCCTGCACGTTTATTGCCTCAAGTACTGGACAGTGCGCTGGATGCTCAGGTACTACGAGGAGATAATAGTGGTCTTGCAAATGACATTCGGAAAGAAATGAAGGCATTGAATGGAAAGCTGCTGAAAACCAAAGACAGAAATACAAGGAAGGACATACAAAGGGAACTTAGGTCTCTATCCAAAGAAGAACGTAAAAGGCAGCAACTTGCTGTAACAGATGTACTGAAAAGTGCAGATGTAATATTAACTACTTTGATTGGGGCTTTCTCTAAGAAACTAGACAGCACTTCATTTGATTTGGTGATTATTGATGAAGCTGCTCAAGCACTTGAGATAGCATGCTGGATACCTCTGTTGAAGGGTTCAAGATGTATACTCTCAGGGGACCATCTTCAACTTCCTCCAACCATTCAAAGTGTTGAAGCCGAGAAGAAAGGCTTAGGAAGAACGCTCTTTGAACGACTTGCAGAGATGTATGAAGATGAAATCACATCAATGCTTACTGTCCAGTACCGTATGCATGAACGTATCATGGATTGGTCTTCTAAAGAGCTTTACAACAGTAAGATCAAGGCTCATCCAAGTGTTACTGCACATATGTTATACGATCTTGAGGGTGTGAAGCGGACATCTTCAACTGAACCGACCCTTATTCTCATAGACACAGCTGGGTGTGATATGGAAGAAAAGAAAGATGAAGAAGATAGCACCTTTAATGAAGGTGAAGCCGAGGTTGTTTTACTGAAGATGTTGAAAAACAAGGAGGACCGGCTGAAGGATGTTGAAATCTCAACAGTTGATGGTTTCCAGGGAAGGGAGAAGGAAGCCATTATTATATCAATGGTTCGATCAAATTCAAAAAAAGAGGTTGGCTTTTTGAGTGATCGTCGGCGAATGAATGTGGCTGTGACACGATCTAGAAGGCAATGCTGTCTTGTCTGTGACACCGAGACAGTCAATGGTGATGGATTTCTAAAGCGATTGATTGAGTACTTTGAGGAGCATTGTGAATATCTGAGTGCATCTGAGTTCCAGAATTAG 1737 0.4295 MATGTGSKKKAPPLSLQQFISITAPLLDLEKEAEISSSITTGASRNLDTAQKRGSTILNLKCVDVQSGLMGKSLIEFQSTKGDVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITIAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPASDLIPVLFGERSPTVCKKDVSFTPININLDHSQILACAASNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKTKDRNTRKDIQRELRSLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDSTSFDLVIIDEAAQALEIACWIPLLKGSRCILSGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYEDEITSMLTVQYRMHERIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTSSTEPTLILIDTAGCDMEEKKDEEDSTFNEGEAEVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRSRRQCCLVCDTETVNGDGFLKRLIEYFEEHCEYLSASEFQN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0431 578 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 202 479 - -
Aed4g0431 578 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 45 182 - -
Aed4g0431 578 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 202 479 - -
Aed4g0431 578 Gene3D - 403 481 IPR027417 -
Aed4g0431 578 Coils Coil 258 294 - -
Aed4g0431 578 CDD SF1_C_Upf1 405 565 IPR041679 -
Aed4g0431 578 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 487 567 - -
Aed4g0431 578 Gene3D - 482 577 IPR027417 -
Aed4g0431 578 Pfam AAA domain 198 371 IPR041677 GO:0004386
Aed4g0431 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 569 IPR027417 -
Aed4g0431 578 Gene3D - 44 144 - -
Aed4g0431 578 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 487 567 - -
Aed4g0431 578 Pfam AAA domain 380 479 IPR041679 -
Aed4g0431 578 Pfam AAA domain 480 548 IPR041679 -
Aed4g0431 578 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 45 182 - -
Aed4g0431 578 Gene3D - 200 402 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0431 Aed-Chr4 3074406 3081776 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0431 K19036 - gmx:100810545 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0431 4 3074406 3081776 Aed4g0431 4 3074406 3081776 ECH