Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed4g0413 | ATGGCACCAAGATGGAAAGGAAAAGATGCAAAAGCCAAAAAGGATTCAGAAGCTGAAGCCCTCAAGGAACCCATGTCAAAGATTGTATCTCAACTTCAGTCTTCTCAAGTTCAATCAGATACTTGTGGATTTCTCTCCGGTAAAAGTGTGCACTTAGTAGTGGGAGCAGAACAACCTGATCTGCTTGATAAAGCATGCTTTGGCCGACCCATGAGAACCGTTGAAAAGGACAAACAATACTGGTTTCAGCTAAGCTTTGAGGAGGCGTTCTACCTATGTTATTCCTTGAAATGCCTCAAGATGAATCACAGCAATACCGGTCCCCACAACGATGAAGAACTGTGGCATTACATCAAGTCCCGGAAAGAAACATTCCCTTGTTTCTACAAGGCTTATTCCCACCATTGA | 408 | 0.4338 | MAPRWKGKDAKAKKDSEAEALKEPMSKIVSQLQSSQVQSDTCGFLSGKSVHLVVGAEQPDLLDKACFGRPMRTVEKDKQYWFQLSFEEAFYLCYSLKCLKMNHSNTGPHNDEELWHYIKSRKETFPCFYKAYSHH | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed4g0413 | 135 | Pfam | tRNA intron endonuclease, N-terminal domain | 43 | 115 | IPR006678 | GO:0000213|GO:0006388 | |
| Aed4g0413 | 135 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Aed4g0413 | 135 | PANTHER | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE | 1 | 134 | - | - | |
| Aed4g0413 | 135 | PANTHER | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 | 1 | 134 | IPR006676 | GO:0000213|GO:0006388 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed4g0413 | Aed-Chr4 | 2943778 | 2944185 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed4g0413 | K15322 | - | gmx:100810335 | 202.601 |