Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0411 ATGGGTTTGGATTTGTTCTTTTGGCTTGTGATTTGTTTACCTTTCCACTTTGCTTTTCTAGCCTCAACGTTCTACCAGATGAATCTAAAGATGTTTTCTTTTTTTGTTGGGTCGAAGGTTTTGATGTTGTCTGACTTGGAAGCTGATTTTATCAACCCATATGATGCTTCATCTCGGATTAATTACTTCATCGTTCCTGAGTTTATTGGGCAGGGCTTCTTGTGCGCTTTCTCCCTTTTAACTGGCCATTGGATCATGTTTTTGTTGACGGTTCCTGTTACATGTTATCATGTGATGCTGTACATGAAACGGCAGCATCTCATTGATGTTACTGAAGTGTTTAGGTTACTTAACTCTGAGAAGAAATTTCGGATAGCCAAACTTGCTTATTACTTAACAATCATCTTTATAGCTATCTTCAGGCTTGTGTTGATGCTTGTCTACTATTTAGATTCTGAAGATGAATGA 468 0.3761 MGLDLFFWLVICLPFHFAFLASTFYQMNLKMFSFFVGSKVLMLSDLEADFINPYDASSRINYFIVPEFIGQGFLCAFSLLTGHWIMFLLTVPVTCYHVMLYMKRQHLIDVTEVFRLLNSEKKFRIAKLAYYLTIIFIAIFRLVLMLVYYLDSEDE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0411 155 PANTHER CORNICHON-RELATED 4 145 - -
Aed4g0411 155 Pfam Cornichon protein 19 140 IPR003377 GO:0016192
Aed4g0411 155 PANTHER PROTEIN CORNICHON 4 145 - -
Aed4g0411 155 SMART Cornichon_2 6 140 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0411 Aed-Chr4 2921122 2924606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0411 K20368 - gmx:100527262 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0411 4 2921122 2924606 Aed4g0411 4 2921122 2924606 ECH
Aed4g0411 4 2921122 2924606 Aed8g1412 8 18654182 18660917 PCT