Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0400 ATGGGATCTTCCATCTTTGGATTGTGCTTCCTCACGTTCCTATTGTTCGCCCCAGTTGCATTCTCGGAACGGTGCAACCCGCAGGACAAGAAAGTGTTGCTCCAAATCAAGAAGGACTTCAACAACCATTACTTGCTAGCCTCGTGGAACCCAGACGCCGATTGCTGCGATTGGTACTGCGTCGAGTGCGACTCCAAAACGCACCGCATCAACTCCCTCGTCATACTATCCTCTGTTCCCGACACCAATTTCTCCGGCCAAATACCACCCTCCGTCGGTGACCTACCTTACCTCGAGACTCTCGAATTTCACAAGCTACCTAAACTCACCGGCCCAATCCAACCCACCATCGCAAAGCTCACTAAACTCAAAGAGCTTTACATCAGCTGGACCAACATCTCCGGCCCAGTACCCAATTTCTTGGCCCAACTCACTAACCTCCAGTTTCTGGACCTCTCCTTTAATAACCTCTCGGGCCCGATTCCAAGCTCACTTTCCCAGCTCCCTAACCTAGTGTCCTTACGCTTGGACCGAAACAGGCTCACGGGCCCAATCCCGGACTCGTTCGGGTCCTTCAAGAAGCCCGGCCCAGCCCTTTGGCTTTCACACAACCAACTTTCGGGGCCCATTCCGGGTTCCTTGGCCAACATCGACCCACAGAGGATAGACTTCTCGAGGAACAAACTCGAAGGCGATGTCACCATGCTCTTCGGGCGTAACAAAACGACACAAATAATTGACGTTTCGAGGAACTTGTTGGCGTTTGATTTGTCCAAAGTGGAGTTCCCTACGAGTTTGATATCGTTGGATCTGAATCACAATAAAATCACAGGGAGCATTCCCGTGGGGTTGACCGCAGTGGATTTTTTGCAGGGGTTCAACGTGAGCTACAATCGCCTCTGTGGTGAGATACCGCAGGGTGGGAAATTGCAAACGTTTGATGCGTATTCGTATTTTCACAACAAGTGCTTGTGTGGGTCACCCCTTCCCAGCTGTAAGTGA 1002 0.513 MGSSIFGLCFLTFLLFAPVAFSERCNPQDKKVLLQIKKDFNNHYLLASWNPDADCCDWYCVECDSKTHRINSLVILSSVPDTNFSGQIPPSVGDLPYLETLEFHKLPKLTGPIQPTIAKLTKLKELYISWTNISGPVPNFLAQLTNLQFLDLSFNNLSGPIPSSLSQLPNLVSLRLDRNRLTGPIPDSFGSFKKPGPALWLSHNQLSGPIPGSLANIDPQRIDFSRNKLEGDVTMLFGRNKTTQIIDVSRNLLAFDLSKVEFPTSLISLDLNHNKITGSIPVGLTAVDFLQGFNVSYNRLCGEIPQGGKLQTFDAYSYFHNKCLCGSPLPSCK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0400 333 Gene3D Ribonuclease Inhibitor 24 333 IPR032675 -
Aed4g0400 333 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Aed4g0400 333 Pfam Leucine Rich repeat 264 278 IPR001611 GO:0005515
Aed4g0400 333 PANTHER POLYGALACTURONASE INHIBITOR 2 8 332 - -
Aed4g0400 333 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Aed4g0400 333 SUPERFAMILY L domain-like 24 332 - -
Aed4g0400 333 PANTHER POLYGALACTURONASE INHIBITOR 1 8 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0400 Aed-Chr4 2867846 2868847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0400 84 332 Receptor kinase-like Gene Family AT5G46330 30.466 1.06e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0400 - - gmx:100799184 609.757