Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0396 ATGACGGAACCAACGGAGCCATCCACGTCATCTCCAATGGCGAGGGACCCAACCACCGTAATTCACCCTAGGCGCGAGCCCTTCGAGTACGGCCTATTGCCAATCCCGCGACTCATCTTCTCCGACCCGGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTAGCGTTATCCTCCAACCAGCGAGTCGACTCAGCTGCAATCTCCGAGTCACTGCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGATACTCTCGCCTCGGTTCTGCACTCCGACGCCGAACCTCTCGTCGCCGCCAAGCTTGCCGAAATCGATTCCGTCGGCGTCGACGTTCATGATCTGGTTTTGTTCCTTTACATTCAATCCTACAAGAGGCTACTTCCCCGCACGCACAAGGACTCCGCTGCTGTCGCCGACGTCTGGCCCTCCACCTCCGCCTTCGACGGCTACTTGTCCGCCCTCTCGCCGCTTCAGCTTGTGCGCAGCAACAGTCGGCGGGGTATGCCATCGCAGGTTGATGAAGAGGCGCATCAGTTGTCATATCTGCAAAAACACTTGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGATAAGGGATCTGAAGGAAATTCCTTTAGTCAATCTTCTCCCTTTTTTGCAAACTCAGACCCTGATATGCCTGCTGTTCCTGTTCCTGTTGCTCAAGTTCATGATTGGCTTCTACAGAATATAGCTGCTGCTTTGGAATATATCTCTGAACGGACTTCTTCTAAGGAAAATGGCCCAGCTAATGCCTCTGATCAGGATGTTGCTATGACTGATGCATGTACTGCCTCAGTTAACAAGGTCTCAACAGGGACTAGAGGTGCAAGTTTCATTGAAGGGATCTCCAAATCATCATATGTGAAGCATGCACCTGACATTAAAGGTTCATCTGTTAAGGTTCTAAATTGCCATGAGTCTGCCATATACATCTTAGCACCTTTGAGATATGCGACTGTCTATGGATGTTCAGATGCAACAATAGTTCTAGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAAAGAGTTCATGTAATCGTAGCAGCAAAACATATTTGCATTGCTAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTCTTGGTGATAACCATAAACTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAATTGGAAGACCATATGAATGAAGTTGGAATTGTGCATACGGTTAATCGATGGGATGAGCCTCTAGCATTAGGCATGGTCGATCCCCATGATTCATTATCTCATCCAGCAGGTGTCTCAGATGTTCAAGCGGAATCTGCTACTCGGGTGGACCCTGATCAGTTCACTAATTTTGTGCAAAAAACTTTAGAGGAGATAAGGCAACTCTTACGAGAAGCACCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCACTCCATCTTCAGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGATCTTTGGCAGACAATGGAATGGCACATTTAA 1557 0.474 MTEPTEPSTSSPMARDPTTVIHPRREPFEYGLLPIPRLIFSDPAQTLIPLKQKLLALSSNQRVDSAAISESLQISIEHARLVLDTLASVLHSDAEPLVAAKLAEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRGMPSQVDEEAHQLSYLQKHLVLTMDRFEHLGFLIQFGDKGSEGNSFSQSSPFFANSDPDMPAVPVPVAQVHDWLLQNIAAALEYISERTSSKENGPANASDQDVAMTDACTASVNKVSTGTRGASFIEGISKSSYVKHAPDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKHICIANCRECVFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEDHMNEVGIVHTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVQKTLEEIRQLLREAPLEESRKRELSSALHLQETFVSFIVYKAIDLWQTMEWHI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0396 518 PANTHER UNCHARACTERIZED 14 465 IPR039589 -
Aed4g0396 518 PANTHER UNCHARACTERIZED 467 496 IPR039589 -
Aed4g0396 518 MobiDBLite consensus disorder prediction 1 20 - -
Aed4g0396 518 MobiDBLite consensus disorder prediction 1 16 - -
Aed4g0396 518 Pfam Tubulin binding cofactor C 311 426 IPR012945 -
Aed4g0396 518 ProSiteProfiles C-CAP/cofactor C-like domain profile. 278 417 IPR017901 -
Aed4g0396 518 PANTHER BNAC04G02540D PROTEIN 14 465 - -
Aed4g0396 518 PANTHER BNAC04G02540D PROTEIN 467 496 - -
Aed4g0396 518 Gene3D - 291 459 IPR016098 -
Aed4g0396 518 SMART carp 357 391 IPR006599 -
Aed4g0396 518 SMART carp 319 356 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0396 Aed-Chr4 2832754 2840933 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0396 K16810 - gmx:100819271 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0396 4 2832754 2840933 Aed4g0396 4 2832754 2840933 ECH