Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0395 ATGACGGAACCAACTGAGCCATCCACGTCATCTCCATTGGCGAGGGACCCAACCACCGTGATTCACCCTAGGCGTGAGCCATTCGAGCACGGCCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCAACCAAACCCTAATCCCGTTGAAGCAGAAGCTTCTCGAGTCATCCTCCAACCAGCGAGTGGACTCGGCGGCCATCTCCGAGTCGCTCCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGACACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCGTCGCCGCCAAGCTCGCCGAAATCGATTCCGTCGGCGTCGACGTTCATGATCTGGTTTTGTTCCTCTACATTCAATCCTACAAGAGACTCCTCCCGCGCACACACAAGGACTCCGCCGCTGTCGCCGACGTCTGGCCTTCCACCTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTTGTACGCAGCAACAGTAGGCGGTTTATGCCATCCCAGGCTGATGAAGAGGCGCATCAATTGTCGTATCTGCAAAAGCACATGGCTAACATTGTATCTCTTCTAGCAGAGCCTGTGGAGGGAGAAGGCGAAGAGTCCCTGGTTTTAACCATGGATAGATTTGAGCATCTTGGGTTCCTAATTCAGTTTGGTGATAAGGGACCAGAAGGAAATTCTTTTAGGATCTCTAAATCGTCATATGCGAAGCATGCATCTGACATTAAAGGTTCTTTTGTTAAGGTTCTAAATTGCCACGAGTCTGCCATCTACATCTTAGCACCATTGAGATATGCCACTATCTATGGATGTTCAGATGCAACAATAGTTATAGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAACGGGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTGTTTTCTTTTTGGGAGTGAATCAGCAACCACTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTTTAATACTTATTATGCCCAATTGGAGGAGCATATGAATGAAGTTGGAATTGTGCCCACAGTAAACCGATGGAATGAACCTCTAGCATTGGGCATGGTTGATCCCCATGATTCATTGTCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACAGAGGTGGACCCTGATCAGTTCACTAATTTTGTGATTCCAAACTGGCTTGGAGAAGAGTCCACTAGGTCTACGAAAGACAATCCATTCACTTTACCAGATGCTTATATGGCATCAAAGCATAAAAATCACAAAAATCTAGAGGAGATAAGGCAACTCTTACGAGAAGCATCTTTAGAAGAAAATCGCAAACGAGAATTGTCATCTGCGCTCCATGTCTACTTCAAGGACTGGTTATATGCTTCGGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1455 0.4804 MTEPTEPSTSSPLARDPTTVIHPRREPFEHGLLPIPRLIFSDPNQTLIPLKQKLLESSSNQRVDSAAISESLQISIEHARLVLDTLASILHSDSEPLVAAKLAEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHMANIVSLLAEPVEGEGEESLVLTMDRFEHLGFLIQFGDKGPEGNSFRISKSSYAKHASDIKGSFVKVLNCHESAIYILAPLRYATIYGCSDATIVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPFNTYYAQLEEHMNEVGIVPTVNRWNEPLALGMVDPHDSLSHPAGVSDVQAESATEVDPDQFTNFVIPNWLGEESTRSTKDNPFTLPDAYMASKHKNHKNLEEIRQLLREASLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0395 484 PANTHER UNCHARACTERIZED 234 484 IPR039589 -
Aed4g0395 484 PANTHER BNAC04G02540D PROTEIN 234 484 - -
Aed4g0395 484 Coils Coil 437 460 - -
Aed4g0395 484 Pfam Tubulin binding cofactor C 251 363 IPR012945 -
Aed4g0395 484 Gene3D - 232 400 IPR016098 -
Aed4g0395 484 PANTHER BNAC04G02540D PROTEIN 11 232 - -
Aed4g0395 484 SMART carp 294 328 IPR006599 -
Aed4g0395 484 SMART carp 256 293 IPR006599 -
Aed4g0395 484 PANTHER UNCHARACTERIZED 11 232 IPR039589 -
Aed4g0395 484 ProSiteProfiles C-CAP/cofactor C-like domain profile. 223 354 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0395 Aed-Chr4 2825721 2831925 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0395 K16810 - cit:102608543 604.749