Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0366 ATGGAAAAGATGGAACATTTCAGCCACATCCACCCTCTAATGCTAAAACGGGAACATAACAACAACCAAGTCCTTTGCTCAGGTTGTGAAAAACTAATCTCATCAGGTCCTGTCTTCTTCTGCAGCCAATGCAACTTTTTCCTTCACAAAACATGCGCAGAAATTGCACGCCATGTGAAACACCCTTTTCACCCTCAACACCCCCTTGTTCTACTTTCCACCACCCCTTATGAGGGACCCTATGTATGCGATTCATGCAGAGGCATCTTCAACAACTTCGTATACCATTGTTACCATTGCAACTATGACCTTGATGTCTCGTGTGGTTCTCAGCTTAACCCAGATGATGGACACAAGCATGAGTTCATGTCAGTGATAAATTCACAATCTTTTGTTTGTTATGTTTGTGGCATGCATGAAAGCGAGGGTCTTGCTCCTTGCTTATGCACCGTTTGTCAGATTTGGGTTCATTCTAGCTGCGCTGAATTGCCTCTTGCTGTTAGAATAGAAGGCCATGACCACCCTTTGAAACTCACTTATTCACTTCATCAAGTTTACGGTTTCTGGGGTAACTTGACTTGTGGTGTTTGTAATGAAGCTATGAGTCCAGCTTTTGCGGGTTACTTTTGCTCAGCATGCAAGTTTCCCGTGCATTTGAAGTGTTCGCAACAATGTTTAAGAGAAGACAATGAAGATGGGGAATCATTACTCACAGGCTCAGGCTATGAAACTGAGGAATCGACCCAGGATATTGATTTTTCTTTTAGTTTCTTTAGTCATGAACATTCGTTGAAGCTCATCACGGAGGAAGAGAGTGATGATCATGTCCAATATTTTGATAAACTCTGTGACGCGTGTGTTCAACCCATCATGCCACCTTTCTTTTCTTGTGAAGAAGAAGAAAACTGTGGCTTCTTTTTGCACCAATGTTGTGCCGAGTTACCAAGAGTGAAGCAACACCCGTTTCATAAGCACCCTCTGACTCTTCAATCCAAGGCTCCTAATTATGATGGCATTTACAAGTGCGACGGATGCAAAAGATTGAGCAATGGTTTTGTGTATCGTTGTGATGTGTGTCAATTCGAACTTGATGTTGGTTGTGGTTCCCTTCAAGAGAGAATTGAACTTGCGAATCACGTGCATCCCTTGTTCCTCAAGAAGACAAGCGTTGCGAGGCAATGCAAAGGTTGTCATGTTTGGTCGAAGCTTGTGTTTGTGTGTGATGTTTGTGAGGATTTTGCTATTGATTGTGGATGTGCTACTCTACCGAGTAAGGCTTGGCACATGTATGACAAGCATCCTCTGAGTCTAAGCTATTATGTTGAAGGGGGTTTGAGGAGGGAATATGAATGTGGCATTTGCAACGAGAAAATGTCTCCGAAGCAATGGTTTTATTACTGTGATGATTGTGACTTTGGTGCTCACCCTTATTGTGTTGGTGGCAAGTCTAGGCGTGTCAAGTTTGGAGGCAGTTTCAAATATGATTTTCATTCACACCCTCTTGCTTTGGTTGATCAAGAGACTGATCAGAAGAACAACACTGAATGTGAAGCCTGTGGTGAAAAGTGCAATGGGTGGACACTTGAATGTGGCGAATGCAAACGCTTCTTTCACAGGGAAGGAAAGTGTTTTTGGAAAGGATTTAAGAATAGTGCTAAGTATTTGGAGTTATCTGGAATTATGAGACACAGGTATGCAGCAAACGTGTTGGCCTCCACGCCCAATGCAACCACAAAGTGA 1740 0.4293 MEKMEHFSHIHPLMLKREHNNNQVLCSGCEKLISSGPVFFCSQCNFFLHKTCAEIARHVKHPFHPQHPLVLLSTTPYEGPYVCDSCRGIFNNFVYHCYHCNYDLDVSCGSQLNPDDGHKHEFMSVINSQSFVCYVCGMHESEGLAPCLCTVCQIWVHSSCAELPLAVRIEGHDHPLKLTYSLHQVYGFWGNLTCGVCNEAMSPAFAGYFCSACKFPVHLKCSQQCLREDNEDGESLLTGSGYETEESTQDIDFSFSFFSHEHSLKLITEEESDDHVQYFDKLCDACVQPIMPPFFSCEEEENCGFFLHQCCAELPRVKQHPFHKHPLTLQSKAPNYDGIYKCDGCKRLSNGFVYRCDVCQFELDVGCGSLQERIELANHVHPLFLKKTSVARQCKGCHVWSKLVFVCDVCEDFAIDCGCATLPSKAWHMYDKHPLSLSYYVEGGLRREYECGICNEKMSPKQWFYYCDDCDFGAHPYCVGGKSRRVKFGGSFKYDFHSHPLALVDQETDQKNNTECEACGEKCNGWTLECGECKRFFHREGKCFWKGFKNSAKYLELSGIMRHRYAANVLASTPNATTK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0366 579 SUPERFAMILY Cysteine-rich domain 147 222 IPR046349 -
Aed4g0366 579 SMART PHD_3 132 214 IPR001965 -
Aed4g0366 579 SMART PHD_3 282 346 IPR001965 -
Aed4g0366 579 SMART PHD_3 450 520 IPR001965 -
Aed4g0366 579 SMART PHD_3 25 87 IPR001965 -
Aed4g0366 579 SUPERFAMILY Cysteine-rich domain 400 482 IPR046349 -
Aed4g0366 579 ProSiteProfiles Zinc finger B-box type profile. 21 66 IPR000315 GO:0008270
Aed4g0366 579 SUPERFAMILY Cysteine-rich domain 494 539 IPR046349 -
Aed4g0366 579 SUPERFAMILY Cysteine-rich domain 33 109 IPR046349 -
Aed4g0366 579 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 543 - -
Aed4g0366 579 ProSitePatterns Zinc finger PHD-type signature. 26 100 IPR019786 -
Aed4g0366 579 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 543 - -
Aed4g0366 579 Pfam C1 domain 431 479 IPR004146 -
Aed4g0366 579 Pfam C1 domain 7 53 IPR004146 -
Aed4g0366 579 Pfam C1 domain 171 222 IPR004146 -
Aed4g0366 579 Pfam C1 domain 321 367 IPR004146 -
Aed4g0366 579 Pfam C1 domain 62 108 IPR004146 -
Aed4g0366 579 Pfam C1 domain 258 312 IPR004146 -
Aed4g0366 579 SUPERFAMILY Cysteine-rich domain 294 381 IPR046349 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0366 - - gmx:121174110 1028.85