Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0365 ATGAGATCAGTGCACAAGGACCCAAATGTTTTCCACTTTAGCCATTCACATCCTTTGGAATGTAAAACCACCCCACCACCCTCCACAGGAAGTAACAGTAACATTGTAAGCTGCTTTGGATGCAAGCTAAAAGTTAATAAGCATGGAGAGAACTATTACCAGTGCAAAACATGTGCCTTTTCTCTTCACCATGTGTGCTACAACATGCCCTTAATCACAAACCACCCTTCACATCCAACCCACGACCTAGTCTTTATTGCAATACCTTTATCATCATCACCCTCCATCTGCGTGGCGTGTGGGAACCATGTCACTGGCTTCTGCTACCACTGTGCTGAATGCAGCATCTTCTTTCATTCTCTGTGCCTTGCACTTCCTGTGTCTCTCGCAATCACCAACCACCCCCACAAAATCAAGCTTGAGTTTTCACCGCCGTATGATTTCTTCTGTGACTTGTGCAACAAACCCAGTTACAAAGGGTGGCTCTATAGGTGCAGCATGTGTGAATTCGATACACATATAGCTTGTGCCGTTGAAAACTTTGAGCAAAACCCATCTTTCCCTCAATCAAGCCCTTTGTTAAGGCAACTTACGAGTCAAGAAGTGGAACATGAAAGGTTTAGTGCAAGTGTTGTTGGTGATAGTTGCAAAGGGTATGAGTATGAGATCATGAATTTGGTGGCACAACAAATTGGTGGGGGAATTATCAAAGAAAAATTTGATAGTGCAGTCGCTGGATGGGACAAGAGATTATATAGTGGTCCAAGGAAAAAGCATAATAAAACTACTGGGAGTAGTGGAAAGATGAAGATTGAGTTACAAGAAAAAGAAGTACTAATAAGTCCTGCTGAACTTTTATTGAATAAGTTAGAAGAAAGAACACCACTTCGGGATAATTCACCGTTTAGTGACTCATATTTTTCAATAGATTTGGCAAAATCATATTCAACTTCAACCCTTGGACGTAGAAGAGAAGGTGGCAGTGAGCACCAGCAGATAACTATGCCAGAGAGAGTTGTAAGCAATAATTCTGAAAAACCATTCGATCTAGTTAATGATTCATACGATGTGGTGCCGCAACAGAATTATAAGGTGGTCAAAGAAGGACGAACTAGTGATTTTGGGAAATCAAGCCAGAGAGACGTCAGAGAGAAGCATAAAATAAAAGGAAAGCTACAGCTGTTCTTGTTGGAGGAATTTCCTAACTTGCTGCCTTTAGCACGGGCACGTGGAAGACACGCGATTTTTGGAGAAAACTGTGAGTAA 1266 0.4179 MRSVHKDPNVFHFSHSHPLECKTTPPPSTGSNSNIVSCFGCKLKVNKHGENYYQCKTCAFSLHHVCYNMPLITNHPSHPTHDLVFIAIPLSSSPSICVACGNHVTGFCYHCAECSIFFHSLCLALPVSLAITNHPHKIKLEFSPPYDFFCDLCNKPSYKGWLYRCSMCEFDTHIACAVENFEQNPSFPQSSPLLRQLTSQEVEHERFSASVVGDSCKGYEYEIMNLVAQQIGGGIIKEKFDSAVAGWDKRLYSGPRKKHNKTTGSSGKMKIELQEKEVLISPAELLLNKLEERTPLRDNSPFSDSYFSIDLAKSYSTSTLGRRREGGSEHQQITMPERVVSNNSEKPFDLVNDSYDVVPQQNYKVVKEGRTSDFGKSSQRDVREKHKIKGKLQLFLLEEFPNLLPLARARGRHAIFGENCE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0365 421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 191 IPR013083 -
Aed4g0365 421 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 10 317 - -
Aed4g0365 421 SUPERFAMILY Cysteine-rich domain 50 136 IPR046349 -
Aed4g0365 421 PANTHER - 10 317 - -
Aed4g0365 421 Pfam C1 domain 134 177 IPR004146 -
Aed4g0365 421 Pfam C1 domain 76 122 IPR004146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0365 Aed-Chr4 2660139 2662568 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0365 - - gmx:102661734 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0365 4 2660139 2662568 Aed4g0365 4 2660139 2662568 ECH