LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g0356	ATGATGGAGGAAGAAGAAGACCAGCAGAAGCTTTCAGATCTGGTGAAGGAACTCGTCCACCGCTTACTATCCCAAAATCTGCCCCCAAATTCGCCGCCGCTAAACCCTAACTCCCCGGAATTCCGAAACTCGCTCCGGTACGCCCTCCGCATCCTCTCGAGCCGTCTGAACCCCTCCGTCGCCCCCGACGCCGCCGCCATCGCCGACTCCATAAAGCGGCGCCTCGCCACCCACGGCCACTCCTCCGAAGCCCTCTCCTTCGCTGACCTCTTCTCCAAATTCGCCTCCAAAGCCCAAAGCGTCAACAACAAATGGGCCGTCATCTACCTCCTCAAAATCATCTCCCAAGATCGCCACAACACAACAACAACCACAACCACACCTCTCCTCCCAAACCTCACTTTCTCCGAACCAACAACCTCCGACAAAGGTTGGAGCAACGGCGCCCTCCTCATCTCCAAGGACCCGGAAAACCGCCGCGACGTCGCGTTCCGCGAATTCGTCACTCTAGTCAAGGAAGAAAACGAGGTGTCGGAAGAGATCCTCGTCCAGGACGTGCTCTACGCGTGCCAGGGAGTGGACGGTAATCTCGTGAAATTCGACACCGAGAGTAAGCGTTATGTTATACCCGACTCGATTAGGGTTCAGAGAGCCACTAGGAGTACGGTTTACAATCTCTGTGAATTAGGGGTTTTGTTTAGGAACGTTAACGGTTACATTTCGCAGAGCATGGATCGGTTCCCCAATGAAGACGTGGGAACCGTTGGCCAAGCTTTCTGCTCCGCTTTGCAGGACGAGCTTAGTGAGTATTACAAGCTGCTGGCGATTCTTGAGGCTCAGGCTTCGAACCCAATTCCTTTGGTGTCGGAATCTGTGAGCTCCGGGAACTATCTTTCCCTCAGAAGGCTGGCTGTTTGGCTGGCTGAGCCCATGGTGAAGATGAGGCTGATGGCTGATTTGGTTGAGAAGTGCAGGGTTTTGCGCGGAGGGGCAATGGCTGGAGCGATTCATTTGCATGCGCAGCATGGCGATCCACTGGTTCATGAGTTCATGAGGAAATTGCTGCAGAGGGTGTGCTCTTCACTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAGCTGGAGGATATCTTTGCCGAGTTTTTCATTGTTGGGCAGCCTGTGAAGGCTGAGTCCCTATGGAGAGAAGGGTATAAGCTCCATGATACCATGCTTCCTTTGTTCATTCCGCCTTCGCTCGCACAGAGGATATTGAGGACTGGGAAGTCAATTAATTTTCTCCGCGTTTGTTGTGATGATCGCGGTTGGGCTGATGCTGCAACCGCGGTTGTTGCTGATAAGGGAGCAATGGCGAGAAGAGGTGGTTTTGGATATGGGGAGACGGACACCCTTGAGTTTTTGGTGGATGAAGCCTCAAAGAGGATTGATAAGCATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCGGTATTTGTTGCTTGGGCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTTGGGCCTGAGCTTTCTGAGCCGGCTAACACTATAAGCTCTTTTAAGCTTTCGGGTTTGCTGGAAAGTGCAATTCGGGCATCTAATGCTCAGTATGATGATCCTGACATTTTGGATAGACTCAGGGTTAAAATGATGCCACACGAGAGCGGTGATAGGGGCTGGGATGTATTTTCACTTGAATATGATGCAAGAGTTCCACTTGATACAGTGTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTCCTGTGGAAGCTTAGAAGAGTGGAGCATGCGCTTACTGGCGCCTGGAAGACCATGAAACCAAACTGCATTACTTCTAATTCCTTTACAAGATTGCAACATGCAGTAAAGATGCAATTAGTTTCGACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAAGTGTTGGAGATATCATGGACAAATTTTTTAAGTGAGATGGAGGTAGCCAAGGATCTTGATGATGTACTTGATGCTCATGAGAAATATCTGCATTCTATTGTAGAGAAATCTCTCCTTGGAGAGCTTTCCCAGTCTCTTTACAAGTCACTATTCATAATTTTTGATCTTATATTACGTTTTCGGAGCCGTGCAGACCGGTTGTATGAAGGTATTCATGAGTTGCAAGCAAGATTCACTGAATCCTCCCTATCCTCTCGAGACCAGAATAAATCACGATCACGGAAGCAACCAAGTGATAAATCTGCTGAACAAGGATCCTGGGTTGCTGATGGGAGGAAAGCTCTAACTCAACGAGCTGGTGAATTTCTACGAAATATGGAGCAAGATCTGGATGCAATTGCTAAGGAGTATTCATCATTGCAAGAGGGATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAATTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATAGGCGGTTGTATCCTAGCATGTAG	2535	0.4777	MMEEEEDQQKLSDLVKELVHRLLSQNLPPNSPPLNPNSPEFRNSLRYALRILSSRLNPSVAPDAAAIADSIKRRLATHGHSSEALSFADLFSKFASKAQSVNNKWAVIYLLKIISQDRHNTTTTTTTPLLPNLTFSEPTTSDKGWSNGALLISKDPENRRDVAFREFVTLVKEENEVSEEILVQDVLYACQGVDGNLVKFDTESKRYVIPDSIRVQRATRSTVYNLCELGVLFRNVNGYISQSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAILEAQASNPIPLVSESVSSGNYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRKLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYKLHDTMLPLFIPPSLAQRILRTGKSINFLRVCCDDRGWADAATAVVADKGAMARRGGFGYGETDTLEFLVDEASKRIDKHLLDVIFKRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLESAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWTNFLSEMEVAKDLDDVLDAHEKYLHSIVEKSLLGELSQSLYKSLFIIFDLILRFRSRADRLYEGIHELQARFTESSLSSRDQNKSRSRKQPSDKSAEQGSWVADGRKALTQRAGEFLRNMEQDLDAIAKEYSSLQEGFISQLPVQQHVDLKFLFFRLDFNEFYRRLYPSM	844

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g0356	844	Coils	Coil	791	811	-	-
	Aed4g0356	844	Coils	Coil	260	280	-	-
	Aed4g0356	844	Pfam	Gamma tubulin complex component N-terminal	183	486	IPR041470	-
	Aed4g0356	844	PANTHER	GAMMA TUBULIN COMPLEX PROTEIN	33	832	IPR007259	GO:0000226\|GO:0000922\|GO:0005815\|GO:0007020\|GO:0043015
	Aed4g0356	844	Gene3D	-	491	836	IPR042241	-
	Aed4g0356	844	PANTHER	GAMMA-TUBULIN COMPLEX COMPONENT	33	832	-	-
	Aed4g0356	844	MobiDBLite	consensus disorder prediction	750	774	-	-
	Aed4g0356	844	Pfam	Gamma tubulin complex component C-terminal	492	837	IPR040457	GO:0043015

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g0356	K16570		-	gmx:100784710	1545.41

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g0356	4	2601838	2606177	Aed4g0356	4	2601838	2606177	ECH