Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0347 ATGGCGTCGAAGCACGGTGTGAAATCGAGAAGGTTCGGATTGAGTGTCTCGAAAGCTGCCAATTCGCCTTCTTCTTCCACCACCTCGTCTTCTAAGCAGTTTCAGGAGACATCCGCTGATGGCCTGAGCTCGCCGGCGTCTTCCTCGGTTCGGAGTAAGCCGCAGCATCATTTTACTCCGGAGACTGCTGCTGCTGCTGTGCCGCCACCTTTGGATGTGCAAAGAGCGAAGGAGAATGTCACGGTGACGGTTCGATTCCGGCCTCTGAATCCAAGGGAAATTCGACAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATAGTGCGAAATGAGTATAACCCATCCATAGCATATGCATACGATCGTGTCTTTGGTCCCACAACCACTACTCGTCAAGTCTATGATGTTGCTGCTCAGCATGTTGTTAGTGGTGCTATGGAGGGTATCAATGGTACGGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACCCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCCCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGTCTGATTCTTCTGCATACCAGACTCCAAACCGAGAGTTTCTTCTTCGAGTTTCATACTTGGAAATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGGCAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTATGTCGAGGGAATAAAGGAAGAAGTTGTACTCTCCCCTGCTCATGCATTGTCCCTTATTGCAGCTGGAGAAGAGCACAGACATGTTGGGTCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCACAACTGAATCTCATCGACCTAGCAGGCTCTGAGAGCTCAAAAGCTGAAACAACCGGCATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACGGTTATTTCAAAATTGACTGAAGATAAAGCTAGTCACATACCTTACAGGGATTCCAAATTGACTAGAGTACTTCAGTCTTCGCTCAGTGGTCATGGACGTCTTATTTGCACAGTAACCCCTTCATCAAGTAGTACTGAAGAGACGCATAATACATTGAAGTTTGCTCACCGGGCAAAGTATATTGAAATACGAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAACACGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGGGGTATTGTCACAGTTCAACCAAAAGATACTGGTGATGATGACATTGAGCTCCTAAAACAGAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCCACAAAAGCATCACCATCCACAAGATTTCCTAACAGACCTGGTTCTCGTAGAAGACATTCCTTCGGGGAAGAGGAACTGGCATACCTTCCATACAAAAGGCGGGATTTAATCTTAGAGGAGGAAAATATTAATTTGTATAAACGAGACAGTGCCTTGACAGGCACAAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCTTCTACACCTCAAACAGAAAGTGGTAATCATGTGGAGTCCAGACTTTCTCATTCTCAACCTGCAGAAAGCTCTCCGTCTGCTGATCTTGCATCAGAGGCAAGAGAGGATAAATTTATTCATGAGGATAGTTTATTGGGACAGGAGACTCCTTTGACAAGCATCAAATCGGTTGATCAGATTGATCTTCTGAGGGAGCAGCATAAGATTTTATCTGGAGAAGTGGCACTTCATTCAAGTGCTTTGAAGAGGCTGTCTGATGAAGCAACAAGAAATCCTCAGAATGGTCAGGTGGAGATGAAAAGGTTGAAGGATGAAATTACAGCAAAGAGTGAACAAATAGATTTACTGGAAAAGCAAATTTCTAATTCTTTCATTGCTTCAGATAAGACAGAACAGTCAGGAGCATTGCAGACTGTTGCTGAGCTGATGGAACAATTAAACGAGAAATCCTTTGAATTAGAGGTCAAAGCAGCAGATAACCGTGTAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGTGAAAGCCAGCAAGAAACAATTGCCTCTCTGAAGCAGCAACTTGCTGATGCATTGGAGTTGAGAAATTTCAGCCCTGTAGTCAATCATTCACAAAATTTCTCTGCAACCAAAGACTATTGTGGTGAACTTCACCTTGACAAGGGGAATGTGACGATAAACAATTCCAATGAAGGGATTCATTTGCAAGCACAGATAAGTGAGATAGAAGAGCTAAAGCAGAGAATGGAAGAACTAACAGACTCAAAGGAGGAGTTAGAATTTAGAAATCAGAAATTGGCAGAAGAGAGTTCCTATGCTAAAGGGCTAGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAACTCATGAACCAGAACGACAGACTAGCTGCCGAGCTAGCTGCATCCAAGAATCCACCCGCGGAACGTAGAACTAGTGGCACGGTCCAAAATGGACGAAGGGAAAGTCATGTTAGAGTTAGAAGAAATGATCAGGGTGCATCAAACGCCAATATCAAGAGAGAATTAGCCTTGAGCAAAGAAAGGGAACTTTCATTTGAAGCTGCCCTTTTAGAGAAAGATCAGACAGAGATCGAACTTCAAAGAAAGATTGAGGAGTCAAAGCAAAGAGAAGCATATCTGGAAAATGAACTTGCCAATATGTGGGTCCTTGTGGCAAAGCTAAAAAAGTCACAAGGAGCTGAAACTGAGGTTTCAGGGTCAACTAGAGAGAGTTTGCAGTTGGATGGTTTTGACGTTTGA 2967 0.4297 MASKHGVKSRRFGLSVSKAANSPSSSTTSSSKQFQETSADGLSSPASSSVRSKPQHHFTPETAAAAVPPPLDVQRAKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRQVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQESDSSAYQTPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRLICTVTPSSSSTEETHNTLKFAHRAKYIEIRAAQNKIIDEKSLIKKYQHEIQCLKEELEQLKRGIVTVQPKDTGDDDIELLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASPSTRFPNRPGSRRRHSFGEEELAYLPYKRRDLILEEENINLYKRDSALTGTSDKSSGAKSTSTPSTPQTESGNHVESRLSHSQPAESSPSADLASEAREDKFIHEDSLLGQETPLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATRNPQNGQVEMKRLKDEITAKSEQIDLLEKQISNSFIASDKTEQSGALQTVAELMEQLNEKSFELEVKAADNRVIQEQLNQKICECESQQETIASLKQQLADALELRNFSPVVNHSQNFSATKDYCGELHLDKGNVTINNSNEGIHLQAQISEIEELKQRMEELTDSKEELEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNDRLAAELAASKNPPAERRTSGTVQNGRRESHVRVRRNDQGASNANIKRELALSKERELSFEAALLEKDQTEIELQRKIEESKQREAYLENELANMWVLVAKLKKSQGAETEVSGSTRESLQLDGFDV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0347 988 MobiDBLite consensus disorder prediction 1 72 - -
Aed4g0347 988 MobiDBLite consensus disorder prediction 868 901 - -
Aed4g0347 988 MobiDBLite consensus disorder prediction 546 589 - -
Aed4g0347 988 Coils Coil 405 439 - -
Aed4g0347 988 CDD KISc_CENP_E 79 403 - -
Aed4g0347 988 MobiDBLite consensus disorder prediction 546 595 - -
Aed4g0347 988 MobiDBLite consensus disorder prediction 883 897 - -
Aed4g0347 988 PANTHER CENTROMERE PROTEIN E 542 980 - -
Aed4g0347 988 PANTHER CENTROMERE PROTEIN E 55 541 - -
Aed4g0347 988 PRINTS Kinesin heavy chain signature 271 288 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 PRINTS Kinesin heavy chain signature 355 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 PRINTS Kinesin heavy chain signature 150 171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 PRINTS Kinesin heavy chain signature 306 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 438 IPR027417 -
Aed4g0347 988 Coils Coil 457 491 - -
Aed4g0347 988 Gene3D Kinesin motor domain 71 434 IPR036961 -
Aed4g0347 988 Coils Coil 921 952 - -
Aed4g0347 988 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 542 980 - -
Aed4g0347 988 Coils Coil 798 832 - -
Aed4g0347 988 ProSiteProfiles Kinesin motor domain profile. 79 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 Coils Coil 730 757 - -
Aed4g0347 988 MobiDBLite consensus disorder prediction 967 988 - -
Aed4g0347 988 SMART kinesin_4 77 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 ProSitePatterns Kinesin motor domain signature. 305 316 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed4g0347 988 MobiDBLite consensus disorder prediction 15 56 - -
Aed4g0347 988 Pfam Kinesin motor domain 85 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0347 988 Coils Coil 840 867 - -
Aed4g0347 988 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 55 541 - -
Aed4g0347 988 Coils Coil 662 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0347 Aed-Chr4 2506746 2524097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0347 1 701 Miscellaneous Gene Families AT5G06670 65.680 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0347 K11498 - gmx:100815027 1703.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0347 4 2506746 2524097 Aed4g0347 4 2506746 2524097 ECH
Aed4g0347 4 2506746 2524097 Aed8g1489 8 19972644 19993107 PCT