Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0340 ATGAACACTTCCTCCACACTCTTCGGACTCCTGGTGATGGCCGACGACCCGTTGACCGTGGGGCCCGGGCTTGACTCGAAGCTGGTGGGCAAGGGCCAAGGAATGTTGTTGTGGACCGCAGAACATCCTGATTTCCATCGAAACATATCTCCAGAATTTCTGGGTCTCTACAAGGAGAAGCTGAGCCACCTTCGGTTCTACTTGCACGACATTCTAAGCGGCCCAAAGCCCAGCTCAGTGAAAATAGCGCAGGCCCGGATGACATACACCTCCCCCACGTTGTTCGGGCTCCTGCTGATAGCCGACGACGCGTTGACCGTGGGCCCGGAACCTGACTCCAAGGTTGTGGGAAGGTCCCAAGGAATCCAGGCCTTTGCGGACCAGAAAGAGCATGGACTGGTGATGGTTCATAACTTGGCATTCACGAAAGGGATATTCAACGGCAGTACCCTCACCTTGTTGGGGCGGAACCCGCTGCGCTCCGACGTCAGGGAAATTCCGATTGTTGGCGGGACCGGGACTTTCCGGTTTGCTCGTGGCTATGCTAAGATCAACACTCACAATGCTGATCCTCACACAGGAGATACTGTTGAGGAGTTCAACGTTTACGTGTTCCATTATTAG 624 0.5465 MNTSSTLFGLLVMADDPLTVGPGLDSKLVGKGQGMLLWTAEHPDFHRNISPEFLGLYKEKLSHLRFYLHDILSGPKPSSVKIAQARMTYTSPTLFGLLLIADDALTVGPEPDSKVVGRSQGIQAFADQKEHGLVMVHNLAFTKGIFNGSTLTLLGRNPLRSDVREIPIVGGTGTFRFARGYAKINTHNADPHTGDTVEEFNVYVFHY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0340 207 PANTHER NUCLEOPORIN-RELATED 57 206 IPR004265 -
Aed4g0340 207 PANTHER DIRIGENT PROTEIN 17-RELATED 2 42 - -
Aed4g0340 207 PANTHER NUCLEOPORIN-RELATED 2 42 IPR004265 -
Aed4g0340 207 PANTHER DIRIGENT PROTEIN 17-RELATED 57 206 - -
Aed4g0340 207 Pfam Dirigent-like protein 62 205 IPR004265 -
Aed4g0340 207 Pfam Dirigent-like protein 3 44 IPR004265 -
Aed4g0340 207 Gene3D - 55 203 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0340 Aed-Chr4 2463653 2466213 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0340 - - gmx:100789492 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0340 4 2463653 2466213 Aed4g0340 4 2463653 2466213 ECH