Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0331 ATGAAGCGAGTGTGGAGATTCTCCTCAGACGCAAAGCGAGTTCAGTTGTTGCTCTTCCAATCCCATAATTTCCATGGATTCTCAAACCCTAAAACCACGCCCTCCTTCGCCACCGCCGCCGCGCTATCTCGTCGGCGCAAGCACAATACCGTGTCGAACACAGCCTCCACCCTCACTCCTTTGTTCACCGCCAAGTCTGGCTCTTTAACCAAAGTCGCGATTCTGAGGAAGGAGCTCATTCGGGAATCATGCAACTCTGATAGGATTCAAACTATTTTGGACGATAATTCCGACACTTTGAATCGCCGTCAACCCAATGGATCTGTGTTGCTCAAACTTATGAATCAATTGAATTCAAATCCTTCCCTTGCCCTCCAGGTGTTTAGTTGGAGAAGAAAGAGATCTAATGTTGAAAATCCTATGGATGCGTATGAGTACTCTAAGGGTATAAAAGCTGCAGGCAGATCTGGGAATGTTGACTTAGCTATTACGCTCTTTAAGGAGGCTGGTGTCAAAGGTGTCAAGACAACCAGCACTTACAATGCGCTAATGGGTGCTTTTATGTTCAATGATCTTGCTGATAGTTGCCAGTCCTTGTTTTGTGATTTGAAGAGGGATCCAAGTTGCGATCCTTCTATCACCACGTACAATATTCTTCTATCTGTTTTTGGTAACTTGATGCTGGTTGATCACATGGAAGCAACATTCAATGAGATACAGAAGTTAAGCATTCCCATGAACATCAGCACTTACAATCACTTGATTGCTGGATATATCACGGCTTGGATGTGGGGTGATATGGAAAAGGTGTTTCAAATGTTGAAGTCAAGCCATGTCAAGCCTAACATGAAAACCTTCCTGCTAATGCTTCGTGGGTATGCAAATTCGGGTAATCTGGAAAGGATGGAAGAGATATATTCCTTCATAAGGGATCATGTTAATATAAACGAAATTCCATTAATTAGATGTATGATATGTGCTTATTGTAGAAGTTCTGAAGCAGATAGACTTAAGAAGATAGAGTTATTGTTGAAGTTTATTCCAGAAACAGGGTACCGGCCATGGTTAAATATTTTGTTGATTAAACTCTATGCCAAGGAAGACTGGTTAGAGAAAATGGAGAACGCTATAAATGAGGCATTTGAGCATGGAACCTCTATAGCAACCAAAAGTATTTTGAGATGTATAATTGCAACTTATTATCGGTGGAATGCAGTAGACAAGCTAGAAAATTTTGTGAAACGTGCTGAAATCTCTGGGTGGAGTATCTGCCGATCCTTATATCATTGTAAGCTAGTCATGTATGCATCACAGAAGCCCTTACAAGAAATGCATAGTGTTCTTGAGGAGATGGAATACGTCAAGCTGAAGCACACAAAGAAAACATTATGGATAATGTACAAAGCTTACATGAACCATGGCCAGAGTTACATGATAATTGTTTTTGGAGGATACCAAAGCATATATTGGTTATGGCTCGAAAAGACTTCAAAGCACAAGGTAGAAAATCTTTTGATCCTTTGGTTCCATGCGCAAAGAAAAACAGGGCATAGAAATGAAATTCAGAGCTTTGACTTCAAGGTCGGTTACTTCAATAATACAGCTGATCCTGAAACCCAAGCTAAAGAAGAGAAACAGGATTGCCGGATTTCTGAAGTGTGCTTAAAACTAGGGCTGCCTCTAAAAGTCCATTAA 1695 0.4088 MKRVWRFSSDAKRVQLLLFQSHNFHGFSNPKTTPSFATAAALSRRRKHNTVSNTASTLTPLFTAKSGSLTKVAILRKELIRESCNSDRIQTILDDNSDTLNRRQPNGSVLLKLMNQLNSNPSLALQVFSWRRKRSNVENPMDAYEYSKGIKAAGRSGNVDLAITLFKEAGVKGVKTTSTYNALMGAFMFNDLADSCQSLFCDLKRDPSCDPSITTYNILLSVFGNLMLVDHMEATFNEIQKLSIPMNISTYNHLIAGYITAWMWGDMEKVFQMLKSSHVKPNMKTFLLMLRGYANSGNLERMEEIYSFIRDHVNINEIPLIRCMICAYCRSSEADRLKKIELLLKFIPETGYRPWLNILLIKLYAKEDWLEKMENAINEAFEHGTSIATKSILRCIIATYYRWNAVDKLENFVKRAEISGWSICRSLYHCKLVMYASQKPLQEMHSVLEEMEYVKLKHTKKTLWIMYKAYMNHGQSYMIIVFGGYQSIYWLWLEKTSKHKVENLLILWFHAQRKTGHRNEIQSFDFKVGYFNNTADPETQAKEEKQDCRISEVCLKLGLPLKVH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0331 564 PANTHER EXPRESSED PROTEIN 1 478 IPR044179 GO:0003729
Aed4g0331 564 Pfam PPR repeat family 176 222 IPR002885 -
Aed4g0331 564 Pfam PPR repeat family 247 295 IPR002885 -
Aed4g0331 564 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Aed4g0331 564 Gene3D Tetratricopeptide repeat domain 242 312 IPR011990 GO:0005515
Aed4g0331 564 Gene3D Tetratricopeptide repeat domain 67 241 IPR011990 GO:0005515
Aed4g0331 564 PANTHER OS05G0407900 PROTEIN 1 478 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0331 157 368 Miscellaneous Gene Families AT4G11690 21.759 4.37e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0331 - - gmx:100792116 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0331 4 2375081 2378342 Aed4g0331 4 2375081 2378342 ECH