Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0330 ATGGACGACGTCGCTTTGTACTCTCTGCTTTTTTTCATGTGCTTCTTGCATTCCGTACGAGGGATACTGGACCCCAACGATTTCCTCGCTCTGCAATCGATTCGGAAGTCTCTTCACGATGTTCCCGGTTCCAAATTCTTCTCATCCTGGGACTTCACCGCCGACCCCTGCAACTTCGCCGGCGTTTTCTGCGCCGACGACAAAGTCATCGCGCTCAACCTCGGCGACCCCAGGGCCGGTTCCCCCGGCCTCACCGGAAAACTAGACCCTTCCATTTCCAAACTCTCTGCTCTCGCCGACTTCACCGTCGTTCCGGGGAGAATCTACGGTCATCTCCCTCAGTCTCTCTCTCAATTGAAAAACCTCCGCTTCCTCGGCGTCAGCCGCAACTTCATCTCCGGCGAGATTCCGGCAGGTCTAGGTCAGCTTCGGAACCTCAGAACAATCGATCTCAGCTACAACCAACTCTCCGGAACAATCCCTCCGTCCATCGGAACCATGCCGGAGCTAACAAACCTAATGCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCTCGTTCGCTTCGGCTTATTCACTAACCCGCCTCGAACTCAAACACAACACTCTCTCCGGTTCGCTCGCACCGTACTCGCTCCCTCCTTCCCTACAGTACCTCTCTCTATCATGGAACCGTCTCACCGGCCCCGTGGACCGGCTCTTGATCCGGCTGAACCGGCTTAACTTCCTGGACCTTGGCTTAAACCAGTTCACAGGCCCAATCCCGGCCCAACTATTCACATTCCCTCTCACAAATCTCCAACTCGAAAGAAACCAATTCTCCGGCCCGGTCCAGCCGTTTAATGAAGTGACAATACAGACCGTCGATCTCAGCTACAACCGGTTATCCGGTGAGGTGTCGCCCATGCTAGCGAGAGTGCAGAACCTGTACCTGAACAACAACGGTTTCACGGGGCAGGTTCCGGGCAGCTTCGTGGACCGGTTACTGGCTGCGGGCATTCAGATTCTGTATTTGCAGCACAATTTCCTGACCGGCATTGCGATAAATCCGACGGCGGAGATTCCATTGAGCAGCACCTTGTGTTTGCAGTATAACTGCATGGTGCCACCCGTTCAGACGGCGTGCCCCTTCAACGCTGGCAGAAGGAAAATAAGGCCAGCTCAGCAGTGTAACCGCTAA 1179 0.5513 MDDVALYSLLFFMCFLHSVRGILDPNDFLALQSIRKSLHDVPGSKFFSSWDFTADPCNFAGVFCADDKVIALNLGDPRAGSPGLTGKLDPSISKLSALADFTVVPGRIYGHLPQSLSQLKNLRFLGVSRNFISGEIPAGLGQLRNLRTIDLSYNQLSGTIPPSIGTMPELTNLMLCHNRLSGSVPSFASAYSLTRLELKHNTLSGSLAPYSLPPSLQYLSLSWNRLTGPVDRLLIRLNRLNFLDLGLNQFTGPIPAQLFTFPLTNLQLERNQFSGPVQPFNEVTIQTVDLSYNRLSGEVSPMLARVQNLYLNNNGFTGQVPGSFVDRLLAAGIQILYLQHNFLTGIAINPTAEIPLSSTLCLQYNCMVPPVQTACPFNAGRRKIRPAQQCNR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0330 392 Pfam Leucine Rich Repeat 145 165 IPR001611 GO:0005515
Aed4g0330 392 SUPERFAMILY L domain-like 48 366 - -
Aed4g0330 392 Gene3D Ribonuclease Inhibitor 26 189 IPR032675 -
Aed4g0330 392 Gene3D Ribonuclease Inhibitor 190 379 IPR032675 -
Aed4g0330 392 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Aed4g0330 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 1 392 - -
Aed4g0330 392 PANTHER LRR RECEPTOR-LIKE KINASE 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0330 Aed-Chr4 2370179 2371357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0330 17 371 Receptor kinase-like Gene Family AT3G51740 33.598 2.26e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0330 - - gmx:100817314 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0330 4 2370179 2371357 Aed4g0330 4 2370179 2371357 ECH
Aed4g0330 4 2370179 2371357 Aed8g0774 8 6597761 6598954 PCT