Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0328 ATGAAGAAAGGAAAGGGGAAGAACAACGGCTTGTTGCCGAATTCCTTGAGGATTATCTCTCTGTGCCTCAAAACTGTGTCAACGAATGCCACCACCGTTGCTTCCACCGTGCGCTCCGCCGGCGCCTCCGTCGCCGCTTCTATTTCCTCTTCTAACGAGGATCACAAAGATCAGGTAACCTGGGCTGGTTTTGATACACTGGAGCTTGATCCATCTAACTTCAAACGTGTTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTGGAGGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGTGATGGTCCAGTTTCCTTTCTACAGATGCAGCCCTTCCCTGTAGGTTGTGATGGCCAGGAGGGATTCAGAAAGTCGCACCCTTTACTATTAGTTGTTTCTGGGGATGACACTAGCAATATAAACCAGAACAGTACCAGTTTGAGTGGTTTAGGAAGGGATGGTAATGTTGAGACTCAACCTGGGAAAAATGTCAACTCTTCAACAACTGTTCGGTTCTACTCCTTGAAGTCTCACTGTTATGTTCATGTTCTGAGGTTCCGTTCCACTGTGTGTATGATCAGATGCAGTTCACAGATAATAGCTGTTGGTCTTGCCACACAAATATACTGCTTTGATGCTGTGACTCTTGAGAATAAGTTCAGTGTTCTCACTTATCCTGTTCCTCAGTTAGCTGGACAAGGAACAACTGGTGTTAATGTTGGTTATGGTCCAATGGCTGTGGGTCCAAGGTGGTTGGCATATGCTTCTAACAACCCCTTGCCCTCTAATTTAGGTTGCTTAAGCCCACAAAACTTCAGTGCTTCTCCGGGAATTAGCCCATCAACTTCCCCAAGCAGTGGTAGTTTAGTGGCTCGTTATGCAATGGAGTCCAGTAGACATTTAGCTGCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCCTCTTCTCCGGTACCATCAAATCCAGGTGTGAAAGTCAATAGGGCTACAGGAATTGATGCAGATAATGCGGGAATGGTAATCGTTAAGGATTTTGTTTCCAGAAGTATCATATCACAATTCAAAGCTCACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTCCTGGTCACTGCATCAGTCTATGGGAATAACATTAATATATTTCGGATAATGCCATCATTCACATGCAGGAGTTCAGGCATTCCAAGCTCCAACTGGAACTCCTCTCATGTGCATCTTTATAAACTTCATCGAGGAATAACACCAGCTATGATTCAGGACATTTGTTTCAGTAATTTTAGTCAGTGGATTGCAATTGTCTCATCCAAGGGTACTTGTCATCTTTTTGTTTTGTCACCCTTTGGGGGTGATACTGGTTTTCGAATTATTAGTTCTCAGGGTGAAGAACCGTCCCTACTCCCAGTTTTTTCTCTGCCTTGGTGGTATACTCCGGCTTCCATTTCTTATCAGCAATCTTTGCCTCCCCCAGCACCTGTTGTCCTTTCTGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTTCTGCGAATGTGACAGGAAAAGTTTTTGTGCCATCTGGTGCCATTGCCGCCATCTTTCATAATTCCTTATCTCACTCGCAACAGCTTGTTAACTCAAAGGCAAAACCCTTAGAACATATATTGGTATATACACCTTCAGGTCATGTAGTTCAGCATGAACTTCTGCCATCTGTTGGTTTAGAAACAACTGATAGTGGTTTGAGAAACCAGTCAACTTCACTCCTGCATACGCAGGAAGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCAGAATGGCCAGAAAGAGGGGATACTTGCTGCAATACCTTTGATAGACAAGGAGGTATTGAGAGAGTTCAAGAGAAAATAGGTTATAGTGACGTCCATGGATTGGATAGAGATGGGGCAAGGGAAAAGATGGTAAAATCTTCTAGTGAGGGTGTGCAAGACAGGTTTCATTGGTATATATCTAATGCGGAGGTTCAAGGGAATTTTGGAAGGTTACCTATATGGCAAAAGTCTAAGATTTGTTTCTCTTCAATGAGTTGTGCGGGAGCTAGTTTCAGTGCTACTGGGGAGTTTGAAATTGAAAAGGTCCCTGCTAATGAAGTTGAAATAAGGCGGAAGGAGCTGCTGCCTGTTTTTGACCATTTTCATAGCATCAGATCAAGCTGGAATGAGAGAGGCCTTGCTGGGGAAAGATATTTAAGGTCTACATCTCCTGTTCCCAATCAAGCTGATGACAAGGAAACTGCTGATGTGACAGTTATTTGTCATTCGAAGCCAGCATCACTGAGTTCCACTGAAAGCTCCGAAGGAGGTTCATCAAGAAGAATTGAAAATCTGCTTGATTTGGATCAAGTTGTTTCTAGTTATCAAATACTTGGTGAGATATGCCTGGAAAGAATGGGAACAATCAATGTTGAGCCTTCTCTACAAAACCCGATTGTGATGGAAAGTCCTATATTCCAAGGGAGAAATCTAACTTCTGAAGGAAGAGATTCTATAGGCGTTGGGATCAGTGAGGACTCCGCATCGGTCCTAGAACATGATTCACACGAGGCTGAATTTGTGGAAGTAGCCTCGGCAAAGCAAAATGAAGGTGTTAGGATATCTTTCGAGGAGGAGCCTGATGGAAGTTACGTGTTAACTGAAGTTGTTACTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAGAGAGCAACTGGAGGAGGATGGAGAGAATGATGAAATGCTTGGTGGCATATTTGTCTTCTCCGAAGAAGGTTGA 2853 0.4346 MKKGKGKNNGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSNEDHKDQVTWAGFDTLELDPSNFKRVLLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPFPVGCDGQEGFRKSHPLLLVVSGDDTSNINQNSTSLSGLGRDGNVETQPGKNVNSSTTVRFYSLKSHCYVHVLRFRSTVCMIRCSSQIIAVGLATQIYCFDAVTLENKFSVLTYPVPQLAGQGTTGVNVGYGPMAVGPRWLAYASNNPLPSNLGCLSPQNFSASPGISPSTSPSSGSLVARYAMESSRHLAAGIIKYCQELLPDGSSSPVPSNPGVKVNRATGIDADNAGMVIVKDFVSRSIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSFTCRSSGIPSSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFVLSPFGGDTGFRIISSQGEEPSLLPVFSLPWWYTPASISYQQSLPPPAPVVLSVASRIKYSSFGWLNTVHNSSANVTGKVFVPSGAIAAIFHNSLSHSQQLVNSKAKPLEHILVYTPSGHVVQHELLPSVGLETTDSGLRNQSTSLLHTQEDEFRVKVEPIQWWDVCRRSEWPERGDTCCNTFDRQGGIERVQEKIGYSDVHGLDRDGAREKMVKSSSEGVQDRFHWYISNAEVQGNFGRLPIWQKSKICFSSMSCAGASFSATGEFEIEKVPANEVEIRRKELLPVFDHFHSIRSSWNERGLAGERYLRSTSPVPNQADDKETADVTVICHSKPASLSSTESSEGGSSRRIENLLDLDQVVSSYQILGEICLERMGTINVEPSLQNPIVMESPIFQGRNLTSEGRDSIGVGISEDSASVLEHDSHEAEFVEVASAKQNEGVRISFEEEPDGSYVLTEVVTDDVDSSSSHHEREQLEEDGENDEMLGGIFVFSEEG 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0328 950 Gene3D - 289 475 IPR015943 GO:0005515
Aed4g0328 950 MobiDBLite consensus disorder prediction 916 950 - -
Aed4g0328 950 Pfam Breast carcinoma amplified sequence 3 501 740 IPR022175 -
Aed4g0328 950 Pfam WD domain, G-beta repeat 358 386 IPR001680 GO:0005515
Aed4g0328 950 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 6 949 - -
Aed4g0328 950 SMART WD40_4 412 455 IPR001680 GO:0005515
Aed4g0328 950 SMART WD40_4 354 394 IPR001680 GO:0005515
Aed4g0328 950 SUPERFAMILY WD40 repeat-like 170 454 IPR036322 GO:0005515
Aed4g0328 950 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 949 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0328 Aed-Chr4 2349857 2357512 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0328 - - gmx:100785780 1626.68