Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0324 ATGAAAGAAGATGTGGAGGATGGCAGCACGCAGAAAGGAATCAGAGAGCCACTTGTGGTTGTGGGGGAACAACAGAAACATGATGCAAACAAAGGGCATCCATGGATGGTTTACTTTACTACATTCGTTGCAGTGTGTGGTTCTTATGAATTTGGCGCTTGTGTTGGATATTCATCTCCCACTCAATATGCTATCAGGAAGGATCTCAGTCTGTCTTTGGCAGAGGCAATGAGATTGTCAGGTGCTTTCTGTGTCGTAGGGTGGCTTGTTGTTTTCTTTTCTGAGGGTCCACTGCCTTTGGACATTGGGAGGCTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCGAAAGAACTCCGAGGGACACTGACTACCTTAAATCAGTTCATGATTGTTTCTGGTGTGTCTCTGTCATTCATAATTGGAAATGTACTTTCATGGAGGGCTTTAGCTTTAATCGGCCTCATTCCCACTGCTGTATTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCCAGATGGCTGGCAAAGAGAGGATATAAAAAAGATTTTGAGGCAGCAATGCAAATACTTCGTGGCAAAGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGATTATATAGCTACTTTGGAGCACCTCCCAAAATCTAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCGCTCAGTCACTATTGGAATTGGACTTATGGTCTGCCAGCAGCTTGGGGGAATCAATGGTGTTTGCTTTTATACCAGCAGTATTTTTGAGCTAGCAGGATTTTCTCCCACCATCGGGACTATAACATATGCTTTCCTTCAGATTGTCATCACAGGTCTTGGAGCAGCCTTAATAGATAAAGCTGGCAGGAAGCCCTTACTTCTTTTATCCGGATCGGGATTGGTCGCAGGATGTTTATTTACAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTGGGTGTTGAGGCAGTTCCAGCATTTGCCATAACTGGCATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTAATGTCTGAGATATTTCCTGTCAATATTAAAGGGCTGGCAGGAAGTGTGGCAACATTAGTGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCTTCCTGAGCTGGAGCTCCTATGGTACCTTCCTTCTTTATGCAGCAATTAATGCACTGGCTATATTATTTATAATTATTGTGGTGCCAGAAACCAAGGGAAAAAGCCTGGAAGAATTACAAGCAGCCATTAACTCATAG 1329 0.4319 MKEDVEDGSTQKGIREPLVVVGEQQKHDANKGHPWMVYFTTFVAVCGSYEFGACVGYSSPTQYAIRKDLSLSLAEAMRLSGAFCVVGWLVVFFSEGPLPLDIGRLATGYGMGVFSYVVPVFVAEIAPKELRGTLTTLNQFMIVSGVSLSFIIGNVLSWRALALIGLIPTAVLLLGLFFIPESPRWLAKRGYKKDFEAAMQILRGKDADISEEAEEIQDYIATLEHLPKSRLLELFHRRYLRSVTIGIGLMVCQQLGGINGVCFYTSSIFELAGFSPTIGTITYAFLQIVITGLGAALIDKAGRKPLLLLSGSGLVAGCLFTAVAFYLKVHEVGVEAVPAFAITGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGLAGSVATLVNWFGAWLCSYTFNFFLSWSSYGTFLLYAAINALAILFIIIVVPETKGKSLEELQAAINS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0324 442 PANTHER - 76 441 - -
Aed4g0324 442 PANTHER - 33 76 - -
Aed4g0324 442 ProSitePatterns Sugar transport proteins signature 1. 294 311 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed4g0324 442 PRINTS Sugar transporter signature 253 263 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0324 442 PRINTS Sugar transporter signature 342 363 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0324 442 PRINTS Sugar transporter signature 365 377 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0324 442 PRINTS Sugar transporter signature 101 120 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0324 442 Gene3D MFS general substrate transporter like domains 30 442 IPR036259 -
Aed4g0324 442 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 429 IPR020846 GO:0022857
Aed4g0324 442 TIGRFAM SP: MFS transporter, sugar porter (SP) family 77 435 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0324 442 Pfam Sugar (and other) transporter 75 438 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g0324 442 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 76 441 - -
Aed4g0324 442 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 33 76 - -
Aed4g0324 442 SUPERFAMILY MFS general substrate transporter 30 436 IPR036259 -
Aed4g0324 442 CDD MFS_GLUT6_8_Class3_like 38 435 IPR044775 GO:0008643|GO:0051119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0324 Aed-Chr4 2327321 2331777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0324 3 441 Organic Solute Cotransporters AT5G18840 54.123 2.53e-178 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0324 K03444 - gmx:100785248 751.895