Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0323 ATGGCGATCAAAGAAGATTTGGAGGAAGGCATGCAGAAAGGAGTCAGAGAGCCACTGGTGGTCCATGCAAGCAAAGGACATCCATGGATGGTTTACTTTACTACATTTGTTGCAGTGTGTGGTTCTTATGAATTTGGAGCTTGTGCTGGATATTCATCTCCAACTCAAGATGCTATCAGGAAGGATTTCAGTCTGTCTTTGTCAGAGGCAATGAGAGTGTCAAGTGCTTTCTGTGTTGCAGGGTGGCTTGTTATTTACTTTTCTGAGGGTCCAGTGCCTTTGGATATTGGGAGGCTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCAAAAGAACTCCGGGGGACACTAACTACCTTAAATCAGTTCATGATCACTGCTGCTGTGTCAGTGTCATTCACAATTGGAAATGTAATTTCATGGAGGGCCTTAGCTATAACTGCTCTTATTCCCACTGCTGTTTTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCAAGATGGCTAGCAAAGAGAGGACATCAAAAAGATTTTGAGGCAGCACTGCAGATACTTCGTGGCAAAGATGCCGATATATCTGAGGAGGCAAAGGAAATTCAGGATTATATAACTACTTTGGAGAAGCTTCCAAAATCCAAACTGCTGGAATTGTTTCATAGAAGATATTTGCGTTCAGTCACTATTGGAATAGGCCTAATGGTTTGCCAGCAGTTTGGGGGAATCAATGGAATTTGCTTTTATACAAGCAGTATTTTTGAACTAGCAGGATTTTCTCCGACCATCGGGACTATAACATATGCTTGCCTTCAGATTGTGATCACAGGTCTTGGAGCAGCCTTAATAGATAAAGCTGGCAGGAAGCCCTTACTTCTTATATCTGGATCAGGATTAGTCGCTGGATGTATGTTTACAGCAGTTGCATTCTATCTCAAGGTCCATGAGGTAGGTGTTGCAGCAGTCCCAGCACTTGCCGTAACAGGAATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCTGAAATATTTCCTGTCAATATTAAAGGGCTGGCAGGAAGTGTGGCAACATTAGTGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCTTCATGAGCTGGAGCTCCTATGGTACCTTCATTCTTTATGCAGCAATTAATGCACTGGCTATTTTATTTATAATTGTTGCGGTGCCAGAAACCAAGGGGAAAAGCTTGGAACAATTACAAGCAGCCATTAACTCATAG 1311 0.4233 MAIKEDLEEGMQKGVREPLVVHASKGHPWMVYFTTFVAVCGSYEFGACAGYSSPTQDAIRKDFSLSLSEAMRVSSAFCVAGWLVIYFSEGPVPLDIGRLATGYGMGVFSYVVPVFVAEIAPKELRGTLTTLNQFMITAAVSVSFTIGNVISWRALAITALIPTAVLLLGLFFIPESPRWLAKRGHQKDFEAALQILRGKDADISEEAKEIQDYITTLEKLPKSKLLELFHRRYLRSVTIGIGLMVCQQFGGINGICFYTSSIFELAGFSPTIGTITYACLQIVITGLGAALIDKAGRKPLLLISGSGLVAGCMFTAVAFYLKVHEVGVAAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGLAGSVATLVNWFGAWLCSYTFNFFMSWSSYGTFILYAAINALAILFIIVAVPETKGKSLEQLQAAINS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0323 436 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 70 435 - -
Aed4g0323 436 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 27 69 - -
Aed4g0323 436 Gene3D MFS general substrate transporter like domains 24 436 IPR036259 -
Aed4g0323 436 PRINTS Sugar transporter signature 336 357 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0323 436 PRINTS Sugar transporter signature 95 114 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0323 436 PRINTS Sugar transporter signature 359 371 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0323 436 PRINTS Sugar transporter signature 247 257 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g0323 436 Pfam Sugar (and other) transporter 70 432 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g0323 436 ProSitePatterns Sugar transport proteins signature 1. 288 305 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed4g0323 436 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 423 IPR020846 GO:0022857
Aed4g0323 436 CDD MFS_GLUT6_8_Class3_like 32 429 IPR044775 GO:0008643|GO:0051119
Aed4g0323 436 PANTHER - 70 435 - -
Aed4g0323 436 PANTHER - 27 69 - -
Aed4g0323 436 SUPERFAMILY MFS general substrate transporter 35 430 IPR036259 -
Aed4g0323 436 TIGRFAM SP: MFS transporter, sugar porter (SP) family 71 429 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0323 Aed-Chr4 2322431 2326384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0323 1 435 Organic Solute Cotransporters AT5G18840 53.653 4.68e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0323 K03444 - gmx:100819822 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0323 4 2322431 2326384 Aed2g2506 2 27751150 27758661 ECH
Aed4g0323 4 2322431 2326384 Aed4g0323 4 2322431 2326384 ECH