Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0322 ATGATGACAGACGAGGAACTGATGCAGAAACTTGAAAACTTAACCAAAAACGCCCAGCATCACCAGTTGGAGACTCTCCGTTCGATTCTTCATCACAATGGAACCGTGCAATATCTCCAATCTTTCAAGAAGGGTCCTCTTGAACCCTCCACTTTCACACATGCCGTGCCCCTGTCTTCCTATGAAGACTACGTTGACCACATTAACCAGATGGCAGAAGGGAAAGTTGACCCTTTTCTCTCCATTGATCCTCTCCGCTGCTTCTTCTATAGTTCGGGAACAAGCTCAAGCACCATGAAACCGAAATTGATCCCTTACTTTGATTCAAGCCTTTCCAAGGCTGCCTCATTTATTGGTCACAGAGGCAGTGTTGCAGTTCACCAAAGGCTATTTCCTCCAAGGCCAGAAGTGAACAAGATCCTATGGTTTCTCTATGCTGACAACATTACTACCACTAAATGTGGCTTGAAAGTCATGGCTGCCTCTACATACCCTTTGCAAAGTGGCAATGCTACCCCTCAACAACTTGCAACCTTTTCAAGTCCCCTAGAAGTGATTCTTGAAACTCATGTTGAGCATCAAATGTACTGCCACCTTCTTTGTGGCCTTAGGAATCTTGACCTCATAGATGGAATCACAACCCCTTATGCCATAGGCTTGATTAAAGCATTTGGTCTTCTAGAATCCAAGTGGAAACAACTATGTGATGATCTTGACCATGGTTTTCCATGTAATGAAATTTCTGAGGTGGCAATGAGAGAAGCTGTGACTAAAACACTTGGTGGACCTCAGCCAGAATTGGCCAACAGAATAAGGTTAATCTGTGAAGGTAACAACTGGTGTGGAATTGTGTATAGATTGTGGCCAAACATTCGTTATATCAGGTGTGTTACCACTGGAAGCATGAAGCAGTACTACCAAAAGCTCAAGTACTATGCAGGAGAGGTACCTATTTCAGGAGGAGATTACTTTGCTTCAGAGTGCTGTGTTGGTATAAATTTGGACATAATGCAACCTCCTGAGACAACACGGTTTGTGATGCTTCCAACTTTTGCCTACTTTGAGTTTCTTCCATTTAACATGAGTGAGGACAATGATGTTAGCAAGGAAACTGTGGAATTTAGCAGTGTAGAGGTTGGGAAGATCTATGAAGTGGTTGTTACCACTTACAGAGGATTTTACCGCTACCGTTTGGGTGATATAGTGAGAGTTGTTGGTTTCTATAACTCATCTCCACTTGTGGAGTATGTGATGAGAGCACCTAAAACTCCTGCTGAGATTGTGACTGAGAAGGACTTGATTTCAGCAGTTGAAAGTTTTCAACTTGCACTTAGAGGTGCTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAATGCCGAAGCAGTTGAAGGTATTTGTGGAAGTTCAAGAGGAATCTGATTTTCTGGAGGATAAGATAGAGGAATCAATTGAAGTTTTGAGAAGTTGTATCTCATCTCTCGAGAGTGGCTTGGGAGCTATATATAAGGTACAGAAGGATAAAGGTCAACTAAGGAACTTGCTGATATTCATCATAAGGCATGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAGAATGGAACATCAGCTGGTCAATATAAACCACCCAAGATCATAAGGAATCATGAAGTTGTCAAACTCTTGGAAAAATCAGCCTTTGTGACAGTATCATTCGATGGCTAA 1722 0.4204 MMTDEELMQKLENLTKNAQHHQLETLRSILHHNGTVQYLQSFKKGPLEPSTFTHAVPLSSYEDYVDHINQMAEGKVDPFLSIDPLRCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHRGSVAVHQRLFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLATFSSPLEVILETHVEHQMYCHLLCGLRNLDLIDGITTPYAIGLIKAFGLLESKWKQLCDDLDHGFPCNEISEVAMREAVTKTLGGPQPELANRIRLICEGNNWCGIVYRLWPNIRYIRCVTTGSMKQYYQKLKYYAGEVPISGGDYFASECCVGINLDIMQPPETTRFVMLPTFAYFEFLPFNMSEDNDVSKETVEFSSVEVGKIYEVVVTTYRGFYRYRLGDIVRVVGFYNSSPLVEYVMRAPKTPAEIVTEKDLISAVESFQLALRGAMRIEIVEFASFLDQESMPKQLKVFVEVQEESDFLEDKIEESIEVLRSCISSLESGLGAIYKVQKDKGQLRNLLIFIIRHGAFDQLSELAIKNGTSAGQYKPPKIIRNHEVVKLLEKSAFVTVSFDG 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0322 573 Pfam GH3 auxin-responsive promoter 10 555 IPR004993 -
Aed4g0322 573 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 570 IPR004993 -
Aed4g0322 573 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 570 - -
Aed4g0322 573 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0322 Aed-Chr4 2319373 2322450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0322 8 568 EF-hand Containing Proteins AT1G23160 31.699 2.62e-93 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0322 K14487 - gmx:100786829 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0322 4 2319373 2322450 Aed4g0322 4 2319373 2322450 ECH