Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0296 ATGAGCAAGACCGCTACTCCTAAGGATTCAGGAGGCAACAATACCGTGACCCACTTTGATCTTCTCAAGAAATTTAAACGCTTTAACCCTCTCGAGTCTTCTTTGGCTGTACTCACCTTCTTCTTCGTCGCTTCTCTCTTCATTGCCTGCTTCTTCTACTTCGATTACATAGGCTTCCGCTCCAGAGGCACCACTACTATCCTCGACTTGGATTTTTCATCTTCATCTTCTTCTTCTTCTGACCCAGTTCAGTTTCTGAGCCAAGACGGTGATAAATGTGATGTCTTTGATGGGAATTGGGTTTGGGATGACACCTATCCCCTTTACCATTCTGCTAATTGTTCCTTCTTGGATCAAGGATTTCGCTGCTCCGAGAATCTCAGGCCTGACACCTTCTACACCAAGTGGCGATGGCAACCCAAAGATTGCAACTTGCCCAGATCACCATATCTTGTAGTGCAGGGACGACCTCCTTCTGGTGCACCTGATGGGGTACGAATGACTTTGAGAGTGGATCATATGGACTGGATTTCTCATAAGTGGAGAGATGCAGATGTGCTGGTTCTCAATGCTGGACATTGGTGGAATTATGAGAAGACTGTCAAAATGGGTTGTTACTTCCAAATAGGGAAGGAAGTGAAGATGAATATGACTACAGAAGATGCATTCAGAAAATCAATAGAGACGGTAATGGATTGGGTTGCCAAGGAAGTAAACATAAACAAAACTTATGTCGTTTTCCGAACTTATGCTCCTGTCCATTTCAGCAGGGGTGGTGACTGGAATACTGGTGGTGGTTGTCACTTGGACACACTACCTGATTTAGGCTCCTTGCCAGCAGTATCCAACATCCATTTCAGAACTGTCGTTGATGTCTTGTTGGAACGCACGAATAAATCAGAAGTTTTGAACCTGGACTTGCTTAATGTCACCCAAATGTCAATACGCAGAAGAGATGGCCATGCATCTATTTACTATATCGGACCAGGCAGGACAGCCTCTATGCAGCGGCAAGACTGTAGCCATTGGTGTCTACCTGGTGTCCCTGATTCATGGAACGAGATTCTTTATGCCCTTCTTCTCAAGCGGGAGGATTTTTTCGAACGCAGACAGAATACAACAAAAGTTTCCCAAGTTCCACTATAA 1146 0.4485 MSKTATPKDSGGNNTVTHFDLLKKFKRFNPLESSLAVLTFFFVASLFIACFFYFDYIGFRSRGTTTILDLDFSSSSSSSSDPVQFLSQDGDKCDVFDGNWVWDDTYPLYHSANCSFLDQGFRCSENLRPDTFYTKWRWQPKDCNLPRSPYLVVQGRPPSGAPDGVRMTLRVDHMDWISHKWRDADVLVLNAGHWWNYEKTVKMGCYFQIGKEVKMNMTTEDAFRKSIETVMDWVAKEVNINKTYVVFRTYAPVHFSRGGDWNTGGGCHLDTLPDLGSLPAVSNIHFRTVVDVLLERTNKSEVLNLDLLNVTQMSIRRRDGHASIYYIGPGRTASMQRQDCSHWCLPGVPDSWNEILYALLLKREDFFERRQNTTKVSQVPL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0296 381 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 147 368 IPR029962 GO:0016413
Aed4g0296 381 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 20 147 IPR029962 GO:0016413
Aed4g0296 381 Pfam PMR5 N terminal Domain 92 144 IPR025846 -
Aed4g0296 381 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 147 368 - -
Aed4g0296 381 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 358 IPR026057 GO:0016740
Aed4g0296 381 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 20 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0296 Aed-Chr4 2135497 2141059 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0296 - - gmx:100779356 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0296 4 2135497 2141059 Aed4g0296 4 2135497 2141059 ECH