Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0293 ATGGAATCAACTCACGTAATAGCCATCACAGAAGGAGAAGAGAATAATAAAGCATTCCAAAATCAACTCCCACGTCCCATTTTGAAGAAAAATGATCAAGTCCACTGTGTCTCCAATATTATTACAGCTTCCTCCAAACACAAGCAGATGCTGCAAAGTGGCCATAACAACACAAGGAAGGTAATCCACTGCGTCAAAGTGGGAATCTCTTTGGTTTTGGTTTCACTCTTGTACCTCTTGAATCCTCTATTCAAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCATGTTTGAATTCTCTGCAGGAGCCACACTAGGAAAGGGTTTCAACCGTGGACTAGGAACTATTCTAGGAGGAGGACTAGGTTGCTTAGCAGCAGTTTTTGCCCAAAGCATTGGAATTGGCAGGGTTGGCAACTCAATTATAATCGGATCAATAGGTACATATCTTCGACTGGTTCCAAGCATAAAGAAAAGATACGATTATGGGGTGATGATATTCATGCTGACTTTCAATCTGGTTGTGGTTTCTGGGGTACGTGGCGATGTCAAAGTGTGGGACTTAGCGAGGGAGCGTCTCTTGAATATACTAATGGGCTTCATTGTGTGCGTTTGTGTTACTTTGTTCGTCTTCCCTTTGTGGGCCAGCGATGAACTTCATGATTCCACAGTCTCAAGATTCCTCGACCTCGCCAACACAATTCAAGGTTGTTTTGGGGAATGTACGAAAATCGTTAGTGAAAAGGAAAACCAACCCCGTGCTAGCTTCAACGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTTGCAAAATGGGAACCATGGCATGGAAAATTCGGATTTTCCTACCCATGGGGAAGGTACTTAAAGATTGGTGAAGTTATTCGAGAACTGGCTGCATTTATTCTTGCAGCGGGACGTTGCCTCGAAGCATCAAAAGAGCCCATGGCAACATTGAGACAGACACAATGGGTCCATTTAGAAACATGCGAAGCAGTTGAGTCAAAGGTTGTGTGTATTCTACAAGAACTTGGAGAAAGCATGAAACAATTAAGGAAATGTGATGCAAAGGGCAGCATTTGGGACCAATTGAAAAATGCGAGAGAAGATTTAAGCTTGATAATTTCCACATCCAAAATGGTGGAACTTGAGGATGGTCAAATGCTAGCAATTGCTAGCTTCGTGTTTTTGCTCATGGAAGTGGTAGGGAAGGTTGAGGAATTGGTGAAAGAGGTGGAGGAGCTTGGAGATATTGCTGGTTTTTGCACCACAACTTCATTGTCTTCGTAG 1323 0.4278 MESTHVIAITEGEENNKAFQNQLPRPILKKNDQVHCVSNIITASSKHKQMLQSGHNNTRKVIHCVKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTILGGGLGCLAAVFAQSIGIGRVGNSIIIGSIGTYLRLVPSIKKRYDYGVMIFMLTFNLVVVSGVRGDVKVWDLARERLLNILMGFIVCVCVTLFVFPLWASDELHDSTVSRFLDLANTIQGCFGECTKIVSEKENQPRASFNVCKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWGRYLKIGEVIRELAAFILAAGRCLEASKEPMATLRQTQWVHLETCEAVESKVVCILQELGESMKQLRKCDAKGSIWDQLKNAREDLSLIISTSKMVELEDGQMLAIASFVFLLMEVVGKVEELVKEVEELGDIAGFCTTTSLSS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0293 440 Pfam Aluminium activated malate transporter 54 427 IPR020966 GO:0015743
Aed4g0293 440 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 433 - -
Aed4g0293 440 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0293 Aed-Chr4 2126528 2128611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0293 46 388 Miscellaneous Gene Families AT5G46600 39.835 1.47e-80 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0293 - - gmx:100802201 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0293 4 2126528 2128611 Aed4g0293 4 2126528 2128611 ECH
Aed4g0293 4 2126528 2128611 Aed8g0807 8 6847203 6850908 PCT