Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0290 ATGGAAGCAACGCGATTCTCCCCTAATCACTTCCATCCACACTGCTTCCAAACGAAACCCAACGCACTTAGAGAAAGAAGATACGTAAAATGCATCAACGGAATTGGACCTAGGGTTTCCCTTTCTACATTCCCCACATTCAACGCACCGAACCGGTCCTTGTTTCCGAAGCTGAACCGGACTCTCTCTCTTAACTTCTCCGACCGGCTTCGAGGTGACCATGTGCGCGTCGATGCTCCGGGGAACGAGCTTTCGAACGAGGAAGAGGAAGTTGTTGTTGTTGCACCGTCGCAGGGTGCTGACAGCTCGGGAGCCCTGCAATTGAAACCTTTGATGTTCAGAAACAGGTTTCTGAACTTTGTGCGCTTTGGTTCTGTGATTAACGGCGCCGCGGAGTCGTTTTTCAAGAGCGAGATTCGGAGGAGGCTGTTCGTGACGGCGGTGCTGATTGTGATTAGTCGCGTTGGTTATTTTATTCCTCTTCCGGGGTTTGACAGAAGGTTGATACCGGAAGACTACCTGAGCTTTCTTCTGGCAGATGAACTTGGTGACTTCACTGCTGAGCTCAAGCTATCTATTTTCCAACTTGGAATCAGTCCTCAGATAATAGCATCCATTATTATGCAGGTACTCTGTCATGTTGTCCCTTCTCTAGTAAAGCTACGGAAAGAAGGTCTGGATGGGCATGAGAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTTCTTGCTACTCACTTCCGTATTCAATTTATGCTGCCAGTTATAGGGTCAAGCATGTAATGATGACATCTGTCTTATTAGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCGTCTCTAATCATATGTGTGGGAATACTTACGGGATATATGGAGACATTATACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTGAGTTGGTGGCCATACATGCTTGCAGTATTGGGTATCTTCACCACTGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGCAGGAAAGTAAAACTGCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGAGAGCAATCACCTATTACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCGTTTCCAAGCATTCTTGCAAGTCTGCTGAGGTCACCTTTTTGGGAGCGTGTCAGGGAAATGTTGAACCCTGAAACTTCTGTTGGTGCTGATCCATGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTGTTCAATATATTCGATATTGCTAACATGCCAAAGGAAATTGCTGATTATTTAAATAAGATGGGTGCGAGAATACCAAGCATAAAGCCTGGGAAGGCTACCATAGAGTACCTCTCCAAGGTTCAGGCATCCACACGATTTTGGGGGGGGCTATTGTTAAGTGTTCTGGCCACTACATCAACTGTTCTTGACCACTATTTACGGCGTATCAATGCTGGGTTTGCTATTGGTTTTACATCTGTTCTAATTATTGTCGGTTCCATTATTGAACTTAGAAGATCGTATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCTTTGAGACGATATGGTGTATGA 1683 0.4385 MEATRFSPNHFHPHCFQTKPNALRERRYVKCINGIGPRVSLSTFPTFNAPNRSLFPKLNRTLSLNFSDRLRGDHVRVDAPGNELSNEEEEVVVVAPSQGADSSGALQLKPLMFRNRFLNFVRFGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYLSFLLADELGDFTAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSFGFAILEALIVSCYSLPYSIYAASYRVKHVMMTSVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYMLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLRSPFWERVREMLNPETSVGADPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPSIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSTVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0290 560 SUPERFAMILY Preprotein translocase SecY subunit 123 545 IPR023201 -
Aed4g0290 560 Gene3D SecY subunit domain 127 550 IPR023201 -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 436 458 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 191 211 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 143 161 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 267 292 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 293 316 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 524 542 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 232 255 - -
Aed4g0290 560 PRINTS Preprotein translocase SecY subunit signature 391 410 - -
Aed4g0290 560 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 117 559 - -
Aed4g0290 560 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 117 559 IPR002208 GO:0015031|GO:0016020
Aed4g0290 560 Pfam SecY 192 538 IPR002208 GO:0015031|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0290 52 560 Miscellaneous Gene Families AT2G31530 74.952 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0290 - - gmx:100803256 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0290 4 2085618 2094083 Aed4g0290 4 2085618 2094083 ECH