Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0249 ATGGCAGCACCAAGAAGAATTGAGATGCTGCTGAGCATTTCCCTTGTTGTGATAACTCTTTGGGGTGTCACATTGGCTCAATCTGAATCATCAAGCTGCACCAATGTGTTCATAAGTCTTTCTCCATGCCTTGACTATGTAACAGGAAATGCCTCTGCCCCTTCCTCTTCTTGCTGCTCTCAGCTTGAATTTGTGGTGAGGTCACAGCCATTGTGTTTATGTGAGGTTGTTAGTGGTGGTGCTTCATCTATTGCTGCAAGTTTCAACATTAATCAGACTAGGGCTTTGGCACTCCCTACTTCTTGCAGTGTTCAGATACCTCCTATTAGCACCTGCACTGCCTCAGGTTCTTCCTCACAAGGTGTTTCTGTTTCCAACTTTCCAAATTCCCCTTCAGGAATTGGATCAAATACTGTATCATCAACGACCGGAGGCAGTAGAAGTGTCGGTGCCTCATATCATGGAAATTCAAGTTCAACAAAAATGCCATGTTCTTTGCTTGTCATCATGTTTGTCCTTGCAACGACTTTGACTTTCACCATCAAGACCTAG 552 0.442 MAAPRRIEMLLSISLVVITLWGVTLAQSESSSCTNVFISLSPCLDYVTGNASAPSSSCCSQLEFVVRSQPLCLCEVVSGGASSIAASFNINQTRALALPTSCSVQIPPISTCTASGSSSQGVSVSNFPNSPSGIGSNTVSSTTGGSRSVGASYHGNSSSTKMPCSLLVIMFVLATTLTFTIKT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0249 183 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 182 IPR043325 -
Aed4g0249 183 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 113 IPR036312 -
Aed4g0249 183 SMART aai_6 33 112 IPR016140 -
Aed4g0249 183 Pfam Probable lipid transfer 20 112 IPR016140 -
Aed4g0249 183 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Aed4g0249 183 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Aed4g0249 183 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Aed4g0249 183 Gene3D - 30 110 IPR036312 -
Aed4g0249 183 CDD AAI_LTSS 40 104 - -
Aed4g0249 183 PANTHER LIPID TRANSFER PROTEIN 6 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0249 Aed-Chr4 1787276 1789114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0249 9 113 Lipid Metabolism Gene Families AT3G22600 47.222 1.25e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0249 - - gmx:100801492 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0249 4 1787276 1789114 Aed4g0249 4 1787276 1789114 ECH
Aed8g0831 8 7038678 7039609 Aed4g0249 4 1787276 1789114 PCT